RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KCNMB3Q9NPA1 279 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 DMAP1Q9NPF5 467 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 IL37Q9NZH6 218 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 SMAD5-AS1Q9Y6J3 95 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 RYR2Q92736 4967 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 TCHHQ07283 1943 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 USF3Q68DE3 2245 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 TRAV17A0A0B4J275 112 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 A0A0U1RQK1 487 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF320A2RRD8 509 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 ARHGEF35A5YM69 484 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC33A1O00400 549 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 MCF2LO15068 1137 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CTDSPLO15194 276 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 OGTO15294 1046 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC37A4O43826 429 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CYTIPO60759 359 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SAP30O75446 220 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 AADACP22760 399 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 LMO2P25791 158 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PIK3R1P27986 724 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 OTX2P32243 289 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 MMP12P39900 470 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 FRKP42685 505 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 IER3P46695 156 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 OR3A3P47888 321 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PEX3P56589 373 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 GSCP56915 257 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CYCSP99999 105 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 NFATC2Q13469 925 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PEX6Q13608 980 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SLMAPQ14BN4 828 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 DUSP5Q16690 384 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 IQCCQ4KMZ1 466 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 FGD3Q5JSP0 725 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C6orf52Q5T4I8 152 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 BSPRYQ5W0U4 402 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 IYDQ6PHW0 289 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 DHRS11Q6UWP2 260 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C3P1Q6ZMU1 363 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 RAPH1Q70E73 1250 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 COX8CQ7Z4L0 72 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C5orf24Q7Z6I8 188 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 VPS36Q86VN1 386 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CATSPERDQ86XM0 798 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C10orf53Q8N6V4 93 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 LRRC52Q8N7C0 313 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 OR5T2Q8NGG2 359 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 UBLCP1Q8WVY7 318 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CKAP2Q8WWK9 683 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SLCO2A1Q92959 643 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 ANKRD9Q96BM1 317 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 ZBED6CLQ96FA7 236 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PDXPQ96GD0 296 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C2orf48Q96LS8 159 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 NSMCE3Q96MG7 304 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 CCL19Q99731 98 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PRMT1Q99873 361 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 HSD17B14Q9BPX1 270 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 DGCR6LQ9BY27 220 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 FUT8Q9BYC5 575 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 FGFBP2Q9BYJ0 223 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 C5orf66Q9H5L9 145 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 ASB7Q9H672 318 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SRD5A3Q9H8P0 318 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 PDRG1Q9NUG6 133 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 GDAP2Q9NXN4 497 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 HACD3Q9P035 362 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 NOCTQ9UK39 431 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 GPR132Q9UNW8 380 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 RNF6Q9Y252 685 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 SELENOKQ9Y6D0 94 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 INTS1Q8N201 2190 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 HCFC1P51610 2035 aa2.95□□□□□ -1.94
TOPBP1-208ENST00000511439 VWFP04275 2813 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SCN1AP35498 2009 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 TRPM6Q9BX84 2022 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 IGLV7-46A0A075B6I9 117 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 MEX3AA1L020 520 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 IGLON5A6NGN9 336 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 PP2D1A8MPX8 630 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 MPTX1A8MV57 137 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 A8MVM7 634 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 E5RGE8 158 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 KIF5CO60282 957 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ACSL4O60488 711 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 TBL1XO60907 577 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 NME6O75414 186 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 DUS4LO95620 317 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC16A8O95907 504 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 KLK3P07288 261 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ZSCAN5DPP0CG00 497 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 ADRB3P13945 408 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 PVRP15151 417 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 GCFC2P16383 781 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 HNF1AP20823 631 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 PGFP49763 221 aa2.94□□□□□ -1.94
TOPBP1-208ENST00000511439 STK19P49842 368 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms