RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TPSAB1Q15661 275 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 ACER2Q5QJU3 275 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 C1orf185Q5T7R7 199 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 LPCAT4Q643R3 524 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PDPK2PQ6A1A2 396 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 H3F3CQ6NXT2 135 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PATL1Q86TB9 770 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 TSPAN33Q86UF1 283 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 DEFB106AQ8N104 65 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GSDMBQ8TAX9 411 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 FNDC8Q8TC99 324 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 HM13Q8TCT9 377 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PYDC1Q8WXC3 89 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 MRPL24Q96A35 216 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 AP2M1Q96CW1 435 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CXorf40BQ96DE9 158 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 ART5Q96L15 291 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 HSFY1Q96LI6 401 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 UTP23Q9BRU9 249 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CLK4Q9HAZ1 481 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 PLGRKTQ9HBL7 147 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 FAIMQ9NVQ4 179 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 RSL24D1Q9UHA3 163 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 KCNG2Q9UJ96 466 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PAIP2BQ9ULR5 123 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 KCNS2Q9ULS6 477 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CLDN16Q9Y5I7 305 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 AP4B1Q9Y6B7 739 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 A0A096LPK6 155 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 GSAPA4D1B5 854 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CCDC160A6NGH7 325 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 HSPB2A8KAH6 182 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 TMEM114B3SHH9 223 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 E9PBE3 544 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 MED7O43513 233 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 OR10H2O60403 315 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ATP6V1G1O75348 118 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 TRMUO75648 421 aaKnown RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 ZNF432O94892 652 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 OR6B1O95007 311 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PGM3O95394 542 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 IGHV4-39P01824 125 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 COX4I1P13073 169 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ZNF8P17098 575 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 CDH2P19022 906 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 POLR2CP19387 275 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 HNF1AP20823 631 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 MAGEA3P43357 314 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 GPR12P47775 334 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ALDH3B2P48448 385 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 SLC1A6P48664 564 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 RAB28P51157 221 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 DCDC1P59894 354 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 RPL7AP62424 266 aaKnown RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 OGDHQ02218 1023 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 HSPB2Q16082 182 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 DEFB110Q30KQ9 67 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 FAM76BQ5HYJ3 339 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 STEAP4Q687X5 459 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CNSTQ6PJW8 725 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 TMEM270Q6UE05 265 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 WASH2PQ6VEQ5 465 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PACS1Q6VY07 963 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CDKL3Q8IVW4 592 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PRSS58Q8IYP2 241 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 DEFB107AQ8IZN7 70 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 NDUFAF2Q8N183 169 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 BBS5Q8N3I7 341 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 SMYD1Q8NB12 490 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 TNIP2Q8NFZ5 429 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ZNF606Q8WXB4 792 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CDKL2Q92772 493 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 FAF2Q96CS3 445 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CFAP36Q96G28 342 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 C1orf74Q96LT6 269 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 IMMP1LQ96LU5 166 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ZNF354BQ96LW1 612 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 MRPL1Q9BYD6 325 aaKnown RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 NUF2Q9BZD4 464 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 CTDSP1Q9GZU7 261 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PALMDQ9NP74 551 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PIGVQ9NUD9 493 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 DCDC2Q9UHG0 476 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 TEKT2Q9UIF3 430 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 RIMS3Q9UJD0 308 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 POMT2Q9UKY4 750 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 ICAM5Q9UMF0 924 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 FAF1Q9UNN5 650 aaPredicted RBP4.77□□□□□ -1.65
GYPB-212ENST00000511198 WIF1Q9Y5W5 379 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
GYPB-212ENST00000511198 PRSS51A0A1B0GVH4 220 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms