RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 RBCK1Q9BYM8 510 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 LYRM4Q9HD34 91 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 ING3Q9NXR8 418 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 COMMD3Q9UBI1 195 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 NUFIP1Q9UHK0 495 aaKnown RBP10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 CBLCQ9ULV8 474 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 EML5Q05BV3 1969 aa10.21□□□□□ -0.77
SH3RF1-203ENST00000508685 ZDBF2Q9HCK1 2354 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 LINC00854A0A1B0GVQ3 168 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 K7ESF4 209 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 ALX3O95076 343 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 ZIC2O95409 532 aaPredicted RBP10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 CPMP14384 443 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 ALAS2P22557 587 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 TGM4P49221 684 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 GFERP55789 205 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 C16orf62Q7Z3J2 963 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 MARCH9Q86YJ5 346 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 CA13Q8N1Q1 262 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 ARHGEF39Q8N4T4 335 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 OR2T33Q8NG76 320 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 NEIL3Q8TAT5 605 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 CLDN23Q96B33 292 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 SPACA7Q96KW9 195 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 TM9SF2Q99805 663 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 YIPF2Q9BWQ6 316 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 PCED1AQ9H1Q7 454 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC38A1Q9H2H9 487 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 FN3KQ9H479 309 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 EVA1AQ9H8M9 152 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 MTHFD2LQ9H903 347 aaPredicted RBP10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 MARCH7Q9H992 704 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 INPP5EQ9NRR6 644 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 PAQR5Q9NXK6 330 aaPredicted RBP10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 CDH10Q9Y6N8 788 aa10.21□□□□□ -0.78
SH3RF1-203ENST00000508685 FAM240BA0A1B0GVZ2 78 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 LMO7DNF2Z398 122 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 GABRPO00591 440 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 LYRM1O43325 122 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 KLF4O43474 513 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 FCMRO60667 390 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 PROS1P07225 676 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 F8A1P23610 371 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 ATP6V1E1P36543 226 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MTNR1BP49286 362 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CLDN20P56880 219 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 RGS8P57771 180 aaPredicted RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 HNRNPKP61978 463 aaKnown RBP eCLIP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 BTG1P62324 171 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CHRNEQ04844 493 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 IL18Q14116 193 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 PGGHGQ32M88 737 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 EIPR1Q53HC9 387 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 NKAIN2Q5VXU1 208 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 HEPHL1Q6MZM0 1159 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 RPL13AP3Q6NVV1 102 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CDC73Q6P1J9 531 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 TSSK4Q6SA08 328 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 USP53Q70EK8 1073 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MCATQ8IVS2 390 aaKnown RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 RNF113BQ8IZP6 322 aaKnown RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 OR2L13Q8N349 312 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 OR8D4Q8NGM9 314 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 ZFAND1Q8TCF1 268 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 ADAMTS15Q8TE58 950 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 UBASH3BQ8TF42 649 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 FAM46AQ96IP4 442 aaKnown RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 DMRTB1Q96MA1 342 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 TGM7Q96PF1 710 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MS4A4EQ96PG1 132 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 KCNJ15Q99712 375 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MARVELD1Q9BSK0 173 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 NDEL1Q9GZM8 345 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 RANGRFQ9HD47 186 aaPredicted RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CTPS2Q9NRF8 586 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 SEMA4GQ9NTN9 838 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 MRPL39Q9NYK5 338 aaKnown RBP10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 NTMQ9P121 344 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 TNFRSF10DQ9UBN6 386 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CACNA1IQ9P0X4 2223 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 CEP192Q8TEP8 1941 aa10.2□□□□□ -0.78
SH3RF1-203ENST00000508685 TMEM131Q92545 1883 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 A0A0A6YYC8 382 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 I3L1I5 382 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 PDGFBP01127 241 aaPredicted RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 C1QBP02746 253 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CELP19835 753 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 PAICSP22234 425 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 APEX1P27695 318 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CXCL12P48061 93 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 PDX1P52945 283 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 TNK1Q13470 666 aa10.19□□□□□ -0.78
SH3RF1-203ENST00000508685 CLPPQ16740 277 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms