RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SFRP5Q5T4F7 317 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 RIMKLAQ8IXN7 391 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF619Q8N2I2 560 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 TOR1AIP2Q8NFQ8 470 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 TUBGCP3Q96CW5 907 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 MRGPRX4Q96LA9 322 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 PRPF18Q99633 342 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 DUSP26Q9BV47 211 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 HDHD5Q9BXW7 423 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 BHLHE41Q9C0J9 482 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 SERHL2Q9H4I8 314 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 ZDHHC2Q9UIJ5 367 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 RNF115Q9Y4L5 304 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 CR1P17927 2039 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CLOCKO15516 846 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 EIF4E2O60573 245 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SOX30O94993 753 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 ADAP00813 363 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 BPGMP07738 259 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CD3EP07766 207 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 YES1P07947 543 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 G6PDP11413 515 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SLC7A1P30825 629 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SERPINB5P36952 375 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 RPS4XP62701 263 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 HBA1P69905 142 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 IFFO1Q0D2I5 559 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CAPRIN1Q14444 709 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 TAB1Q15750 504 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SLC25A53Q5H9E4 307 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 NCMAPQ5T1S8 102 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 OLIG3Q7RTU3 272 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 ATG4DQ86TL0 474 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 PRIMA1Q86XR5 153 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CLECL1Q8IZS7 167 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CLEC4FQ8N1N0 589 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 OR5W2Q8NH69 310 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 LILRB1Q8NHL6 650 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 KISS1RQ969F8 398 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SLC35G5Q96KT7 338 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 SDF2Q99470 211 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 POTEKPQ9BYX7 375 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 QRSL1Q9H0R6 528 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 L2HGDHQ9H9P8 463 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 KLHL9Q9P2J3 617 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
HMGCS1-204ENST00000507293 CENPVL1A0A0U1RR11 272 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 RNF103-CHMP3A0A140T963 221 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 SERINC4A6NH21 518 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ESPNB1AK53 854 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF814B7Z6K7 855 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 SMAD9O15198 467 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 CYP7B1O75881 506 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 H6PDO95479 791 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 CREB1P16220 341 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 MATN1P21941 496 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 CLDN8P56748 225 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 C21orf58P58505 322 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 RAC3P60763 192 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 PPP2R2BQ00005 443 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 SKP2Q13309 424 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 CBFBQ13951 182 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 GPR68Q15743 365 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 PGS1Q32NB8 556 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 OR4F3Q6IEY1 312 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ADAM5Q6NVV9 412 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 BHLHB9Q6PI77 547 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 SEZ6L2Q6UXD5 910 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 BHLHA15Q7RTS1 189 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 KBTBD8Q8NFY9 601 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 HSD17B8Q92506 261 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 NEUROG1Q92886 237 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 FBXW5Q969U6 566 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 OR5B2Q96R09 309 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF300Q96RE9 604 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 PSD2Q9BQI7 771 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 THUMPD3Q9BV44 507 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 NMUR2Q9GZQ4 415 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ESRP2Q9H6T0 727 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 NGBQ9NPG2 151 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 NOP53Q9NZM5 478 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 PRSS50Q9UI38 385 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 KCNE5Q9UJ90 142 aa10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 ING1Q9UK53 422 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 CHD3Q12873 2000 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-204ENST00000507293 VPS13CQ709C8 3753 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 KIAA1324LA8MWY0 1029 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 ETV2O00321 342 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 FCMRO60667 390 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 CYTIPO60759 359 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 STX11O75558 287 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 AK1P00568 194 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 CSTAP01040 98 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 SOD3P08294 240 aa10.23□□□□□ -0.77
HMGCS1-204ENST00000507293 EDNRAP25101 427 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms