RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CDHR4A6H8M9 788 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 FAM25EA8MYX2 175 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 NPIPB8E9PQR5 432 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 ZDHHC11BP0C7U3 371 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-208ENST00000504387 STARP49675 285 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 NTHL1P78549 312 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 PRR5P85299 388 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 RBMS2Q15434 407 aaKnown RBP7.09□□□□□ -1.27
NEDD9-208ENST00000504387 LTB4RQ15722 352 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 NHLRC3Q5JS37 347 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 STPG1Q5TH74 334 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 RGS7BPQ6MZT1 257 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SEZ6L2Q6UXD5 910 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 GDPD4Q6W3E5 623 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 TMUB2Q71RG4 321 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SLC16A13Q7RTY0 426 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 PLA2G15Q8NCC3 412 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 OR10Z1Q8NGY1 313 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 GRHL3Q8TE85 626 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 RFKQ969G6 155 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 FCRL1Q96LA6 429 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SLC38A3Q99624 504 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 MCHR1Q99705 422 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 HRASLSQ9HDD0 168 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SLC6A20Q9NP91 592 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SLC39A1Q9NY26 324 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 SLC7A7Q9UM01 511 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 HEATR5BQ9P2D3 2071 aa7.09□□□□□ -1.27
NEDD9-208ENST00000504387 TRBV23OR9-2A0A075B6M9 112 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 MCRIP1C9JLW8 97 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 LEFTY2O00292 366 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SURF4O15260 269 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SUSD5O60279 629 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PSMB1P20618 241 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SSR2P43308 183 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 KCNJ3P48549 501 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SMIM11AP58511 58 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PRRT3Q5FWE3 981 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ENTPD8Q5MY95 495 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C1orf94Q6P1W5 598 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 BTN2A1Q7KYR7 527 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PDZD9Q8IXQ8 264 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SHISA5Q8N114 240 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CHCHD4Q8N4Q1 142 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM185AQ8NFB2 350 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 OR10K1Q8NGX5 313 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 OR56B4Q8NH76 319 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 NANPQ8TBE9 248 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PIGXQ8TBF5 258 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TM4SF18Q96CE8 201 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CMSS1Q9BQ75 279 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 KCNK15Q9H427 330 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 GLIPR2Q9H4G4 154 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C11orf49Q9H6J7 331 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM185BQ9H7F4 350 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 BRF2Q9HAW0 419 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 FGF20Q9NP95 211 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TM7SF3Q9NS93 570 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C20orf141Q9NUB4 165 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 MARK1Q9P0L2 795 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF230Q9UIE0 474 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 MOKQ9UQ07 419 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 OR51B4Q9Y5P0 310 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 BACE2Q9Y5Z0 518 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 RTTNQ86VV8 2226 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZSWIM8A7E2V4 1837 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ARPC4-TTLL3A0A0A6YYG9 625 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CENPVL1A0A0U1RR11 272 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 A0A1W2PRQ8 180 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM200CA6NKL6 621 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 AGAP14A8MT82 685 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 H7C2Y5 167 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CCSO14618 274 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 RASGRP1O95267 797 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 POP4O95707 220 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF806P0C7X5 589 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 RBMS1P29558 406 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 AKR1C3P42330 323 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 GPR1P46091 355 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TNFRSF17Q02223 184 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 DUSP2Q05923 314 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 STX4Q12846 297 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 FZD5Q13467 585 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 C4orf46Q504U0 113 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 LY6G5CQ5SRR4 150 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PLEKHS1Q5SXH7 462 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZC3H14Q6PJT7 736 aaKnown RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 CD200R1LQ6Q8B3 271 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 GAREM2Q75VX8 874 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SLC9B2Q86UD5 537 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 OR4D10Q8NGI6 311 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 SMPDL3BQ92485 455 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ATOH1Q92858 354 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-208ENST00000504387 TCEAL4Q96EI5 215 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ALG14Q96F25 216 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 PEX11GQ96HA9 241 aa7.08□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF558Q96NG5 402 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms