RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZNF749O43361 778 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 NDUFS3O75489 264 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 KDM4BO94953 1096 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 DRD2P14416 443 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 HIST1H1BP16401 226 aaKnown RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 ABOP16442 354 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 FGF7P21781 194 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 HRH2P25021 359 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 YWHAQP27348 245 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 APEX1P27695 318 aaKnown RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 FMO3P31513 532 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 CCR7P32248 378 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 PITPNBP48739 271 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 DIO3P55073 304 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 HECTD2Q5U5R9 776 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 NOTUMQ6P988 496 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 Q6ZSR9 355 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 REC114Q7Z4M0 266 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 AMER3Q8N944 861 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 EXD3Q8N9H8 876 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 TP53I13Q8NBR0 393 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 OR13D1Q8NGV5 346 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 EEF1AKMT1Q8WVE0 214 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 SMIM4Q8WVI0 70 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 PHF21BQ96EK2 531 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 MRGPRX2Q96LB1 330 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 MBOAT4Q96T53 435 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 FEVQ99581 238 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 CPPED1Q9BRF8 314 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 DOHHQ9BU89 302 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 CPVLQ9H3G5 476 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 METTL8Q9H825 291 aaKnown RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 FGF20Q9NP95 211 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-204ENST00000503468 MIEF1Q9NQG6 463 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 ANGPT4Q9Y264 503 aa2.59□□□□□ -1.99
NEDD4-204ENST00000503468 ELOA3CA0A087WX78 387 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 NRP1O14786 923 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PPP1R2P9O14990 202 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 CTDSPLO15194 276 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 RPP40O75818 363 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 PLATP00750 562 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 TIMP1P01033 207 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 MBP02144 154 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 FCER2P06734 321 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ALDOCP09972 364 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 SELLP14151 372 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ZNF14P17017 642 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 RHCEP18577 417 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 CPT2P23786 658 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 C21orf33P30042 268 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 CRATP43155 626 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 HTRA3P83110 453 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 TMEM115Q12893 351 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 HNRNPA0Q13151 305 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 SNTB1Q13884 538 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 SEC23BQ15437 767 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ARMC12Q5T9G4 340 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ATPAF1Q5TC12 328 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 FAM180BQ6P0A1 224 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PAPD4Q6PIY7 484 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 CRIP3Q6Q6R5 217 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 TMEM207Q6UWW9 146 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 LIPIQ6XZB0 460 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 C17orf107Q6ZR85 190 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 MOB3CQ70IA8 216 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SLC35D2Q76EJ3 337 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 CLEC10AQ8IUN9 316 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 NAGSQ8N159 534 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 MRPL43Q8N983 215 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 AVL9Q8NBF6 648 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 FAM83FQ8NEG4 500 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 LFNGQ8NES3 379 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 OR4M1Q8NGD0 313 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 OR14K1Q8NGZ2 314 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 NEIL3Q8TAT5 605 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 M1APQ8TC57 530 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 RNF141Q8WVD5 230 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PABPC5Q96DU9 382 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 SEC11CQ9BY50 192 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 LRTM1Q9HBL6 345 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 ITM2CQ9NQX7 267 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 GAR1Q9NY12 217 aaKnown RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 THAP10Q9P2Z0 257 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 RNF112Q9ULX5 631 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SLC9A8Q9Y2E8 581 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 DLGAP4Q9Y2H0 992 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 SPIN1Q9Y657 262 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 LY6G6EA0A0G2JKS1 128 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 C2orf92A0A1B0GVN3 265 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PPQ1 181 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PRAMEF25A6NGN4 478 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 LINC00587B1AMM8 73 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 AP4M1O00189 453 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 NTN3O00634 580 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 PRKNO60260 465 aaPredicted RBP2.59□□□□□ -2
NEDD4-204ENST00000503468 FADS1O60427 444 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 CA11O75493 328 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 TFP02787 698 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 EBLN1P0CF75 366 aa2.59□□□□□ -2
NEDD4-204ENST00000503468 PKMP14618 531 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms