RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 F8A1P23610 371 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 AVPR2P30518 371 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 HSD17B7P56937 341 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 FABP5Q01469 135 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 MXD1Q05195 221 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 TDGQ13569 410 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 SERTAD2Q14140 314 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 FGFBP1Q14512 234 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PDZK1Q5T2W1 519 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 DESI1Q6ICB0 168 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PLBD1Q6P4A8 553 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 ULK3Q6PHR2 472 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 FAM131AQ6UXB0 335 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 WDR88Q6ZMY6 472 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 RTL4Q6ZR62 310 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PRR23CQ6ZRP0 262 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 SHFQ7M4L6 423 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 SDR16C5Q8N3Y7 309 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 OR51G2Q8NGK0 314 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PFN4Q8NHR9 129 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 SPRYD4Q8WW59 207 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 HPS1Q92902 700 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 TMEM203Q969S6 136 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 VSTM2LQ96N03 204 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 ZNF426Q9BUY5 554 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 KATNB1Q9BVA0 655 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 ALG8Q9BVK2 526 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 TPK1Q9H3S4 243 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 DNAJB12Q9NXW2 375 aaKnown RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 HAO2Q9NYQ3 351 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 PLEKHB1Q9UF11 243 aaPredicted RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 NDRG2Q9UN36 371 aaKnown RBP11.07□□□□□ -0.64
NUP54-202ENST00000502850 PLCL2Q9UPR0 1127 aa11.07□□□□□ -0.64
NUP54-202ENST00000502850 A0A1B0GWA3 101 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 A0A1W2PQL4 384 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 DAPL1A0PJW8 107 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 FABP12A6NFH5 140 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SLC9B1P1A6NJY1 282 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 H0YIG0 161 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SOCS6O14544 535 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 MT-ND5P03915 603 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 CSF2P04141 144 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SRFP11831 508 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NME1P15531 152 aaKnown RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 TMED10P49755 219 aaKnown RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 EMDP50402 254 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ATP12AP54707 1039 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 PSG6Q00889 435 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 FOXK2Q01167 660 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ZNF542PQ5EBM4 170 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ALG10BQ5I7T1 473 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 LCN1P1Q5VSP4 162 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SIRT6Q8N6T7 355 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ARIH2OSQ8N7S6 290 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ZNF614Q8N883 585 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 BBS1Q8NFJ9 593 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NEIL3Q8TAT5 605 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 MRPL48Q96GC5 212 aaKnown RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 DIRAS2Q96HU8 199 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ZNF285Q96NJ3 590 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SLC38A3Q99624 504 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 TM9SF2Q99805 663 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NDC1Q9BTX1 674 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 FAM60AQ9NP50 221 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ABCB9Q9NP78 766 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 MKKSQ9NPJ1 570 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 BABAM2Q9NXR7 383 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 KLHL21Q9UJP4 597 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 A0A0A6YYC8 382 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 NPIPA5A0A0B4J1W7 369 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 C12orf71A8MTZ7 269 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NPIPA7E9PJI5 369 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 I3L1I5 382 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 GABRPO00591 440 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SLC19A2O60779 497 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 SLC2A10O95528 541 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NTN1O95631 604 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 NPIPA8P0DM63 369 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 PEPDP12955 493 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 IL7P13232 177 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 CELP19835 753 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 S1PR1P21453 382 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 CD27P26842 260 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 MTNR1BP49286 362 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 PPP1CAP62136 330 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ASAH1Q13510 395 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 C1orf61Q13536 156 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 GALEQ14376 348 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP54-202ENST00000502850 DEFB110Q30KQ9 67 aa11.06□□□□□ -0.64
NUP54-202ENST00000502850 ZNF791Q3KP31 576 aaPredicted RBP11.06□□□□□ -0.64
NUP54-202ENST00000502850 GLYR1Q49A26 553 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms