RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FRMD6Q96NE9 622 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 PTCHD1Q96NR3 888 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 OR51V1Q9H2C8 321 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 HRASLS2Q9NWW9 162 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 FLRT3Q9NZU0 649 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CLEC1BQ9P126 229 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 USP36Q9P275 1121 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 FBXL4Q9UKA2 621 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ZMIZ1Q9ULJ6 1067 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 MED31Q9Y3C7 131 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SPTBP11277 2137 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 KNL1Q8NG31 2342 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TRIOO75962 3097 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 A0A0B4J2E0 115 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 A0A0J9YY10 115 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 A0A1B0GX12 115 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 PRR23D1E9PI22 279 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RDH16O75452 317 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RCBTB2O95199 551 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 NGFRP08138 427 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TRAPPC2P0DI81 140 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TRAPPC2BP0DI82 140 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 PRR23D2P0DMB1 279 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 GALP22466 123 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 SLC2A5P22732 501 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 MAP2K3P46734 347 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 EMDP50402 254 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 CTBP2P56545 445 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 VSX2P58304 361 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 UBE2IP63279 158 aaKnown RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ILF3Q12906 894 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 GALEQ14376 348 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 DEFB110Q30KQ9 67 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF542PQ5EBM4 170 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 FAM27D1Q5T7N8 215 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ZCCHC12Q6PEW1 402 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 METAP1DQ6UB28 335 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF438Q7Z4V0 828 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF614Q8N883 585 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 CYB561A3Q8NBI2 242 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 OR13H1Q8NG92 308 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 FYTTD1Q96QD9 318 aaKnown RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TEAD3Q99594 435 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 BEX2Q9BXY8 128 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RBCK1Q9BYM8 510 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 S1PR5Q9H228 398 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RANGRFQ9HD47 186 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 SLC22A31A6NKX4 558 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 HYAL3O43820 417 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 COQ9O75208 318 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 PTP4A3O75365 173 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 NKX2-2O95096 273 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 PPP1R3DO95685 299 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 AK1P00568 194 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 GYPBP06028 91 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 FAM157BP0CG42 384 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ELK1P19419 428 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 CFL1P23528 166 aaKnown RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 E2F1Q01094 437 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RIN1Q13671 783 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 CRMP1Q14194 572 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 QPRTQ15274 297 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 IDNKQ5T6J7 187 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RPL13AP3Q6NVV1 102 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 MZT2AQ6P582 158 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ARL9Q6T311 187 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 IL20RBQ6UXL0 311 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 C19orf18Q8NEA5 215 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 OR4N2Q8NGD1 307 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 OR5W2Q8NH69 310 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 RPLP0P6Q8NHW5 317 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 SLC37A2Q8TED4 501 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 UBASH3BQ8TF42 649 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 MRPL38Q96DV4 380 aaKnown RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 SNX18Q96RF0 628 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 GAS2L1Q99501 681 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TTYH2Q9BSA4 534 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TMEM43Q9BTV4 400 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 KCNN2Q9H2S1 579 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ADGRL4Q9HBW9 690 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TRIM36Q9NQ86 728 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 POT1Q9NUX5 634 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 TMEM5Q9Y2B1 443 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 ENTPD2Q9Y5L3 495 aa9.11□□□□□ -0.95
CLIP1-204ENST00000501271 HEATR5AQ86XA9 2040 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 A0A1B0GWA3 101 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 A6NL46 340 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 CHP2O43745 196 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 IGKV1D-16P01601 117 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PSKH1P11801 424 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 DRD5P21918 477 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 SHC1P29353 583 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 MTNR1BP49286 362 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 LBX1P52954 281 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PSG6Q00889 435 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF85Q03923 595 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 HTR4Q13639 388 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 FHL1Q13642 323 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms