RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
VIM-208ENST00000497849 SORCS2Q96PQ0 1159 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 SLC17A7Q9P2U7 560 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 DCDC2Q9UHG0 476 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 TMEFF2Q9UIK5 374 aaPredicted RBP14.47□□□□□ -0.09
VIM-208ENST00000497849 SNX6Q9UNH7 406 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 SLC25A15Q9Y619 301 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 PMF1-BGLAPU3KQ54 211 aa14.47□□□□□ -0.09
VIM-208ENST00000497849 TRRAPQ9Y4A5 3859 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 GNG14A0A1W2PPG7 69 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 A0A1W2PR80 420 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 H3BQF6 201 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 RGS14O43566 566 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 GLRA3O75311 464 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 RAD51DO75771 328 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 SLITRK5O94991 958 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 KCNH1O95259 989 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 NGFRP08138 427 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 BMP4P12644 408 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 TSPAN8P19075 237 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 ELK4P28324 431 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 CRHR1P34998 444 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 SRP14P37108 136 aaKnown RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 CHRNEQ04844 493 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 MST1LQ2TV78 715 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 TMEM176BQ3YBM2 270 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 PDLIM3Q53GG5 364 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 ARL13AQ5H913 290 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 ZAR1Q86SH2 424 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 SLC43A2Q8N370 569 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 C3orf56Q8N813 242 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 ZNF75CPQ92670 426 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 ELP4Q96EB1 424 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 APIPQ96GX9 242 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 ZNF300Q96RE9 604 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 MRPL57Q9BQC6 102 aaKnown RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 BHLHE41Q9C0J9 482 aaPredicted RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 GLIPR2Q9H4G4 154 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 C3orf14Q9HBI5 128 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 DDX18Q9NVP1 670 aaKnown RBP14.46□□□□□ -0.09
VIM-208ENST00000497849 FAM53CQ9NYF3 392 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 KLHL9Q9P2J3 617 aa14.46□□□□□ -0.09
VIM-208ENST00000497849 LOC390937A0A1W2PQ73 354 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 LRP5LA4QPB2 252 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 OTCP00480 354 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 PROCP04070 461 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 GSTA1P08263 222 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 RPS17P08708 135 aaKnown RBP14.45□□□□□ -0.1
VIM-208ENST00000497849 APOBEC3AP31941 199 aaPredicted RBP14.45□□□□□ -0.1
VIM-208ENST00000497849 MAP3K8P41279 467 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 EIF1P41567 113 aaKnown RBP14.45□□□□□ -0.1
VIM-208ENST00000497849 CCT5P48643 541 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 PRIM2P49643 509 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 CDH13P55290 713 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 SWI5Q1ZZU3 235 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 IQCCQ4KMZ1 466 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 TTMPQ5BVD1 217 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 KLHL17Q6TDP4 642 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 HOXB13Q92826 284 aaPredicted RBP14.45□□□□□ -0.1
VIM-208ENST00000497849 APOPT1Q96IL0 206 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 ATP6V1G3Q96LB4 118 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 SHCBP1LQ9BZQ2 653 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 BPESC1Q9GZL8 116 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 MRPL46Q9H2W6 279 aaKnown RBP14.45□□□□□ -0.1
VIM-208ENST00000497849 HHATLQ9HCP6 504 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 ATP23Q9Y6H3 246 aa14.45□□□□□ -0.1
VIM-208ENST00000497849 HMGB1P1B2RPK0 211 aaPredicted RBP14.44□□□□□ -0.1
VIM-208ENST00000497849 M0R1B8 84 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 MANBAO00462 879 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 ZNF195O14628 629 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 PLIN3O60664 434 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 OR4F21O95013 312 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 HSD3B1P14060 373 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 DDCP20711 480 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 HSD3B2P26439 372 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 TIA1P31483 386 aaKnown RBP eCLIP14.44□□□□□ -0.1
VIM-208ENST00000497849 IL2RGP31785 369 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 MAGOHP61326 146 aaKnown RBP14.44□□□□□ -0.1
VIM-208ENST00000497849 MPP2Q14168 576 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 CD226Q15762 336 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 CARTPTQ16568 116 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 B4GALNT2Q8NHY0 566 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 FBXO27Q8NI29 283 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 TCP10LQ8TDR4 215 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 GPR151Q8TDV0 419 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 ZNF483Q8TF39 744 aaPredicted RBP14.44□□□□□ -0.1
VIM-208ENST00000497849 ZFP90Q8TF47 636 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 TLCD1Q96CP7 247 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 EBPLQ9BY08 206 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 ACPTQ9BZG2 426 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 OCEL1Q9H607 264 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 KCNK9Q9NPC2 374 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 MYNNQ9NPC7 610 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 FKBP7Q9Y680 259 aa14.44□□□□□ -0.1
VIM-208ENST00000497849 A0A0A6YYJ9 748 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 TMEM89A2RUT3 159 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 GJE1A6NN92 205 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 A8MT66 165 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 SLCO1B7G3V0H7 640 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms