RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AADACL4Q5VUY2 407 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CRTC1Q6UUV9 634 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MORN4Q8NDC4 146 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 OR5J2Q8NH18 312 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ARSGQ96EG1 525 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MS4A4EQ96PG1 132 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 BRF2Q9HAW0 419 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ZCCHC3Q9NUD5 404 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MYEF2Q9P2K5 600 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CAMK2AQ9UQM7 478 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 SPTBP11277 2137 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 TRBV5-4A0A0C4DH59 114 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 FARS2O95363 451 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MT-ND5P03915 603 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CCND3P30281 292 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 HLA-FP30511 346 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MAGEB1P43366 347 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ART1P52961 327 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ARFIP1P53367 373 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 STX4Q12846 297 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 SMCO1Q147U7 214 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 FAM71E1Q6IPT2 247 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 NKAIN4Q8IVV8 208 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 TMEM151BQ8IW70 566 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 OR6V1Q8N148 313 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 AUTS2Q8WXX7 1259 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 PTPN18Q99952 460 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 GPR62Q9BZJ7 368 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 POT1Q9NUX5 634 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MIOXQ9UGB7 285 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 PRICKLE3O43900 615 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF821O75541 412 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 HSD3B2P26439 372 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 IFNGR2P38484 337 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CTSOP43234 321 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 DYRK1AQ13627 763 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 LASP1Q14847 261 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 DEFB115Q30KQ5 88 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 B3GNTL1Q67FW5 361 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 SVBPQ8N300 66 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 WFDC5Q8TCV5 224 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 RGMAQ96B86 450 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF705EA8MWA4 302 aaPredicted RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 NPIPB8E9PQR5 432 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SULT1C2O00338 296 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SURF4O15260 269 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 YKT6O15498 198 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 IMPA1P29218 277 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 HTR1FP30939 366 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PTGFRP43088 359 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 RING1Q06587 406 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PDZK1IP1Q13113 114 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 MAP2K5Q13163 448 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 UBXN2BQ14CS0 331 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PGGHGQ32M88 737 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 AVPI1Q5T686 147 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 FAM69AQ5T7M9 428 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 H3F3CQ6NXT2 135 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CORO6Q6QEF8 472 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TBC1D19Q8N5T2 526 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 THEM6Q8WUY1 208 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 FCAMRQ8WWV6 532 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 NXPE3Q969Y0 559 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 HCAR1Q9BXC0 346 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PINK1Q9BXM7 581 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ANKRD19PQ9H560 264 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 P2RX2Q9UBL9 471 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PAK4O96013 591 aaPredicted RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ATP1B1P05026 303 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 NFYBP25208 207 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 MAT2AP31153 395 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 RFC3P40938 356 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 EPHA4P54764 986 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 AP3S2P59780 193 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TBPL1P62380 186 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 MAT1AQ00266 395 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 LILRB2Q8N423 598 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 OR51L1Q8NGJ5 315 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 OR1S2Q8NGQ3 325 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SLC35G5Q96KT7 338 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PRRC1Q96M27 445 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 OR14A2Q96R54 314 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 GAL3ST1Q99999 423 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 DMRT3Q9NQL9 472 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TINAGQ9UJW2 476 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms