RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 UBDO15205 165 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 CGAP01215 116 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 IL6P05231 212 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 UBTFL6P0CB48 400 aaPredicted RBP29.75■■■□□ 2.35
CBX4-203ENST00000494546 KCNJ5P48544 419 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 CARD18P57730 90 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 GSTA3Q16772 222 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 EIF3MQ7L2H7 374 aaKnown RBP29.75■■■□□ 2.35
CBX4-203ENST00000494546 CDC20BQ86Y33 519 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 ZNF619Q8N2I2 560 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 PNPT1Q8TCS8 783 aaKnown RBP29.75■■■□□ 2.35
CBX4-203ENST00000494546 LRRC8CQ8TDW0 803 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 GMPPAQ96IJ6 420 aaPredicted RBP29.75■■■□□ 2.35
CBX4-203ENST00000494546 DACH2Q96NX9 599 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 EMC9Q9Y3B6 208 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 GJE1A6NN92 205 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 RFXANKO14593 260 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 GUSBP08236 651 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 CD8BP10966 210 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 DNAJA1P31689 397 aaKnown RBP29.74■■■□□ 2.35
CBX4-203ENST00000494546 CD79BP40259 229 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 CTBP2P56545 445 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 TMEM176BQ3YBM2 270 aaPredicted RBP29.74■■■□□ 2.35
CBX4-203ENST00000494546 DNAJC14Q6Y2X3 702 aaPredicted RBP29.74■■■□□ 2.35
CBX4-203ENST00000494546 FRRS1Q6ZNA5 592 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 HMGN2P46Q86SG4 172 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 ZNF610Q8N9Z0 462 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 SLC39A3Q9BRY0 314 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 ZIM2Q9NZV7 527 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 NDRG3Q9UGV2 375 aa29.74■■■□□ 2.35
CBX4-203ENST00000494546 MPDZO75970 2070 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 ANKRD17O75179 2603 aaKnown RBP29.73■■■□□ 2.35
CBX4-203ENST00000494546 PRAMEF27A3QJZ7 478 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 H6PDO95479 791 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 NTN1O95631 604 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 POU2F1P14859 743 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 ANXA11P50995 505 aaKnown RBP29.73■■■□□ 2.35
CBX4-203ENST00000494546 C7orf26Q96N11 449 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 SAP130Q9H0E3 1048 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 LIME1Q9H400 295 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 TIGARQ9NQ88 270 aa29.73■■■□□ 2.35
CBX4-203ENST00000494546 SDR39U1Q9NRG7 319 aaPredicted RBP29.73■■■□□ 2.35
CBX4-203ENST00000494546 CHRNEQ04844 493 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 EPGNQ6UW88 154 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 GOLGA6L1Q8N7Z2 621 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 ANKFN1Q8N957 763 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 ROBO4Q8WZ75 1007 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 ZG16BQ96DA0 208 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 REXO5Q96IC2 774 aaKnown RBP29.72■■■□□ 2.35
CBX4-203ENST00000494546 ELOVL5Q9NYP7 299 aa29.72■■■□□ 2.35
CBX4-203ENST00000494546 CCDC168Q8NDH2 2452 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 CASKO14936 926 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 SS18L1O75177 396 aaPredicted RBP29.71■■■□□ 2.35
CBX4-203ENST00000494546 SELENBP1Q13228 472 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 SYPL1Q16563 259 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 SLC25A53Q5H9E4 307 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 COX20Q5RI15 118 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 OR9I1Q8NGQ6 314 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 OR6K3Q8NGY3 331 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 ZFP90Q8TF47 636 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 DYDC1Q8WWB3 177 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 OIT3Q8WWZ8 545 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 SRXN1Q9BYN0 137 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 QRSL1Q9H0R6 528 aaKnown RBP29.71■■■□□ 2.35
CBX4-203ENST00000494546 SLCO1B3Q9NPD5 702 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 LIPT1Q9Y234 373 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 SLC35A3Q9Y2D2 325 aa29.71■■■□□ 2.35
CBX4-203ENST00000494546 PGCP20142 388 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 PGM1P36871 562 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 TXNL4AP83876 142 aaKnown RBP29.7■■■□□ 2.35
CBX4-203ENST00000494546 POU4F3Q15319 338 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 ZNF239Q16600 458 aaKnown RBP29.7■■■□□ 2.35
CBX4-203ENST00000494546 EXOC3L2Q2M3D2 409 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 TIGD2Q4W5G0 525 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 HDXQ7Z353 690 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 MIER2Q8N344 545 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 CPNE4Q96A23 557 aaPredicted RBP29.7■■■□□ 2.35
CBX4-203ENST00000494546 TRNT1Q96Q11 434 aaKnown RBP29.7■■■□□ 2.35
CBX4-203ENST00000494546 GLRX2Q9NS18 164 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 SLC6A13Q9NSD5 602 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 ARGLU1Q9NWB6 273 aaPredicted RBP29.7■■■□□ 2.35
CBX4-203ENST00000494546 TESMINQ9Y4I5 508 aa29.7■■■□□ 2.35
CBX4-203ENST00000494546 SPG11Q96JI7 2443 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 BCAS1O75363 584 aaPredicted RBP29.69■■■□□ 2.34
CBX4-203ENST00000494546 ANP32DO95626 131 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 KRT75O95678 551 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 SLC7A1P30825 629 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 UGT2B10P36537 528 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 PCYT1AP49585 367 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 POLR2JP52435 117 aaKnown RBP29.69■■■□□ 2.34
CBX4-203ENST00000494546 SESN3P58005 492 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 GTF2IRD2BQ6EKJ0 949 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 GTF2IRD2Q86UP8 949 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 TMEM234Q8WY98 164 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 ST8SIA1Q92185 356 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 RMND5AQ9H871 391 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 COQ10BQ9H8M1 238 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 PLSCR4Q9NRQ2 329 aa29.69■■■□□ 2.34
CBX4-203ENST00000494546 ST6GALNAC1Q9NSC7 600 aaPredicted RBP29.69■■■□□ 2.34
CBX4-203ENST00000494546 KLHL28Q9NXS3 571 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms