RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SPNS1Q9H2V7 528 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SLC40A1Q9NP59 571 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 FBXO6Q9NRD1 293 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CHRAC1Q9NRG0 131 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 HRASLS2Q9NWW9 162 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 VPS18Q9P253 973 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CTSFQ9UBX1 484 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 LCMT1Q9UIC8 334 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 BZW2Q9Y6E2 419 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 USP9YO00507 2555 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 FLNBO75369 2602 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HEATR1Q9H583 2144 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TRBV5-4A0A0C4DH59 114 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 A0A0G2JN53 185 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 A0A0J9YVX5 310 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 FAM237BA0A1B0GVD1 139 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PQ67 120 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PRB8 838 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PRQ8 180 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ELOVL7A1L3X0 281 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PGPEP1LA6NFU8 196 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ARHGEF33A8MVX0 844 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 J3QKU1 62 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 POLR1CO15160 346 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 KMOO15229 486 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 NVLO15381 856 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SH3BGRLO75368 114 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SCRG1O75711 98 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 AP2A1O95782 977 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 FGGP02679 453 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PTMAP06454 111 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 APRTP07741 180 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HOXC4P09017 264 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TPM1P09493 284 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SLC35G4P0C7Q5 338 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ACP2P11117 423 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 XRCC1P18887 633 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TCN2P20062 427 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CDH3P22223 829 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 IDSP22304 550 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 BSGP35613 385 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HMGCLP35914 325 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 COILP38432 576 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GABRA4P48169 554 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PRLHRP49683 370 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CCL11P51671 97 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SUOXP51687 545 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GEMP55040 296 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HADHBP55084 474 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 RWDD2BP57060 319 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GSDMDP57764 484 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 C2orf54Q08AI8 447 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HSPA14Q0VDF9 509 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TFDP2Q14188 446 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 EFTUD2Q15029 972 aaKnown RBP eCLIP2.62□□□□□ -1.997e-10■■□□□ 11.6
PTCD3-218ENST00000493430 TAF1AQ15573 450 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HKDC1Q2TB90 917 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ACSBG2Q5FVE4 666 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SLC25A30Q5SVS4 291 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PLEKHS1Q5SXH7 462 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GCNT6Q5T4J0 391 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 DCAF12Q5T6F0 453 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 LRRC38Q5VT99 294 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 FAM205BPQ63HN1 556 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF343Q6P1L6 599 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ABRAXAS1Q6UWZ7 409 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PPP1R21Q6ZMI0 780 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GLDNQ6ZMI3 551 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 LANCL3Q6ZV70 420 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GPRIN3Q6ZVF9 776 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM126BQ8IUX1 230 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CPNE9Q8IYJ1 553 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 RCOR2Q8IZ40 523 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 Q8N377 158 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 RNF175Q8N4F7 328 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 MARVELD2Q8N4S9 558 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SIDT2Q8NBJ9 832 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 FDCSPQ8NFU4 85 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 OR4C3Q8NH37 302 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 DYRK2Q92630 601 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 GTF3AQ92664 365 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 RASL10AQ92737 203 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ZUFSPQ96AP4 578 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 MED8Q96G25 268 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CFAP36Q96G28 342 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CDKN2AIPNLQ96HQ2 116 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF514Q96K75 400 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 WDFY2Q96P53 400 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 VPS35Q96QK1 796 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 PANX2Q96RD6 677 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 RANBP9Q96S59 729 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TIMM29Q9BSF4 260 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ZSCAN5AQ9BUG6 496 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TRAF4Q9BUZ4 470 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 HES7Q9BYE0 225 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 CCDC68Q9H2F9 335 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SLA2Q9H6Q3 261 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 LHX9Q9NQ69 397 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 FGF21Q9NSA1 209 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms