RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
TOM1-215ENST00000491987 BTNL2Q9UIR0 455 aa13.42□□□□□ -0.26
TOM1-215ENST00000491987 WDR45Q9Y484 360 aa13.42□□□□□ -0.26
TOM1-215ENST00000491987 GPR45Q9Y5Y3 372 aa13.42□□□□□ -0.26
TOM1-215ENST00000491987 GJE1A6NN92 205 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 KIAA0513O60268 411 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 PGRP06401 933 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 PCYT1AP49585 367 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 MAPK14Q16539 360 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 TMEM176BQ3YBM2 270 aaPredicted RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 ANKRD34AQ69YU3 496 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 TYW3Q6IPR3 259 aaKnown RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 HMGN2P46Q86SG4 172 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 ROPN1LQ96C74 230 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 MRGPRX4Q96LA9 322 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 OR52E6Q96RD3 313 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 PANX1Q96RD7 426 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 ZBTB18Q99592 522 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 FOXC2Q99958 501 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 THUMPD3Q9BV44 507 aaKnown RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 SRXN1Q9BYN0 137 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 LAT2Q9GZY6 243 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 QRSL1Q9H0R6 528 aaKnown RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 PLEKHF2Q9H8W4 249 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 C6orf203Q9P0P8 240 aaPredicted RBP13.41□□□□□ -0.26
TOM1-215ENST00000491987 EDARQ9UNE0 448 aa13.41□□□□□ -0.26
TOM1-215ENST00000491987 HRNRQ86YZ3 2850 aaPredicted RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 NUP214P35658 2090 aaPredicted RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 A0A1W2PPR1 153 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 PRAMEF27A3QJZ7 478 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 C16orf97H3BN30 126 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 NTN1O95631 604 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 GSNP06396 782 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 AGTR1P30556 359 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 CDKN2CP42773 168 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 HPCAP84074 193 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 SELENBP1Q13228 472 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 SLC25A53Q5H9E4 307 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 FRRS1Q6ZNA5 592 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 ZNF621Q6ZSS3 439 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 EIF3MQ7L2H7 374 aaKnown RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 MAVSQ7Z434 540 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 RNF130Q86XS8 419 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 ZNF619Q8N2I2 560 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 RNF128Q8TEB7 428 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 ZFP90Q8TF47 636 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 ABHD3Q8WU67 409 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 CPNE4Q96A23 557 aaPredicted RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 ZC3HAV1LQ96H79 300 aaKnown RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 REXO5Q96IC2 774 aaKnown RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 MAELQ96JY0 434 aaKnown RBP13.4□□□□□ -0.26
TOM1-215ENST00000491987 CXXC4Q9H2H0 198 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 C12orf49Q9H741 205 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 COQ10BQ9H8M1 238 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 TIGARQ9NQ88 270 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 POLE3Q9NRF9 147 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 PLSCR4Q9NRQ2 329 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 SPG11Q96JI7 2443 aa13.4□□□□□ -0.26
TOM1-215ENST00000491987 F8P00451 2351 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 A0A1W2PNR3 127 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 HMGN4O00479 90 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 SIAH2O43255 324 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 ATE1O95260 518 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 RAF1P04049 648 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 PABPC4LP0CB38 370 aaKnown RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 NID1P14543 1247 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 IDO1P14902 403 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 SLC7A1P30825 629 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 CHRNEQ04844 493 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 KEAP1Q14145 624 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 TIGD2Q4W5G0 525 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 AGBL2Q5U5Z8 902 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 GTF2IRD2BQ6EKJ0 949 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 GTF2IRD2Q86UP8 949 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 TRIML2Q8N7C3 387 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 GLB1L3Q8NCI6 653 aaPredicted RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 PIWIL2Q8TC59 973 aaKnown RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 PNPT1Q8TCS8 783 aaKnown RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 ZNF75CPQ92670 426 aaPredicted RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 ARL8AQ96BM9 186 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 OR52B2Q96RD2 323 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 SAP130Q9H0E3 1048 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
TOM1-215ENST00000491987 TEP1Q99973 2627 aaKnown RBP13.39□□□□□ -0.27
TOM1-215ENST00000491987 IGHV3-15A0A0B4J1V0 119 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 DEFB108AA8MXU0 73 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 ETV2O00321 342 aaPredicted RBP13.38□□□□□ -0.27
TOM1-215ENST00000491987 DNAJA2O60884 412 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms