RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SPPL3Q8TCT6 385 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 CREB3L1Q96BA8 519 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 TCEAL4Q96EI5 215 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 CPEB1Q9BZB8 566 aaKnown RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 RHBGQ9H310 441 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 OR51I1Q9H343 314 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 GAREM1Q9H706 876 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 CPSF4LA6NMK7 179 aaKnown RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 NPIPB8E9PQR5 432 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 AIPO00170 330 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SULT1C2O00338 296 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 TGM5O43548 720 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 MMP11P24347 488 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 RORAP35398 523 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 PPM1AP35813 382 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SSR2P43308 183 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 GIPRP48546 466 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 PRLHRP49683 370 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 SNTB1Q13884 538 aaKnown RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 COTL1Q14019 142 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 HENMT1Q5T8I9 393 aaKnown RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 CAMKMTQ7Z624 323 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SLC39A11Q8N1S5 342 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SAMD12Q8N8I0 201 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SMPDL3AQ92484 453 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 PIGKQ92643 395 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 KAT2AQ92830 837 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 KLK6Q92876 244 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SLC35G5Q96KT7 338 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 MAP3K3Q99759 626 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 C14orf105Q9NVL8 296 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 IL36AQ9UHA7 158 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SLC6A5Q9Y345 797 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 DOCK6Q96HP0 2047 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SLC31A2O15432 143 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 VEGFDO43915 354 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SEMA7AO75326 666 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 LPLP06858 475 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 FGF2P09038 288 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SPP1P10451 314 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 NDUFB7P17568 137 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 DRD5P21918 477 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 RFC3P40938 356 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 VEGFCP49767 419 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 MAZP56270 477 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 PCBP3P57721 371 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 TAS2R60P59551 318 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SERTAD2Q14140 314 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 HAGHLQ6PII5 290 aaPredicted RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 TCEAL8Q8IYN2 117 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 CARFQ8N187 725 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 FTMTQ8N4E7 242 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 OR4F15Q8NGB8 312 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 OR2T35Q8NGX2 323 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ZC3HAV1LQ96H79 300 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 SENP5Q96HI0 755 aaPredicted RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 SLC38A3Q99624 504 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ATF6BQ99941 703 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 KLHL1Q9NR64 748 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 MED9Q9NWA0 146 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 TEX10Q9NXF1 929 aaPredicted RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 H2AFY2Q9P0M6 372 aaPredicted RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 EPHA6Q9UF33 1036 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 GPR179Q6PRD1 2367 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 PLPP1O14494 284 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 CBR1P16152 277 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ACTR1BP42025 376 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 NCBP2P52298 156 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRD9-209ENST00000490814 HMGA2P52926 109 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SMIM11AP58511 58 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 TCEAL5Q5H9L2 206 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SLC30A6Q6NXT4 461 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SMARCD3Q6STE5 483 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 DPPA2Q7Z7J5 298 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 UBE2E3Q969T4 207 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ZNF582Q96NG8 517 aaPredicted RBP9.48□□□□□ -0.89
BRD9-209ENST00000490814 DPAGT1Q9H3H5 408 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 EMC7Q9NPA0 242 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 NPC1O15118 1278 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 LINC01565O15544 149 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 SEC14L5O43304 696 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 APBB3O95704 486 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 RB1P06400 928 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 CTSLP07711 333 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 DDX6P26196 483 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRD9-209ENST00000490814 GIFP27352 417 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 OPRD1P41143 372 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 KRT33BQ14525 404 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 TEAD2Q15562 447 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 ZNF750Q32MQ0 723 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 OR6T1Q8NGN1 323 aa9.48□□□□□ -0.89
BRD9-209ENST00000490814 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms