RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	ZNF696	Q9H7X3	374 aa		4.07	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SH3BGRL2	Q9UJC5	107 aa		4.07	□□□□□ -1.76
SSX2IP-208	ENST00000490476	LRP12	Q9Y561	859 aa		4.07	□□□□□ -1.76
SSX2IP-208	ENST00000490476	HCFC1	P51610	2035 aa		4.07	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ABCA1	O95477	2261 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	OR5H15	A6NDH6	313 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TLCD2	A6NGC4	264 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476		K7EPI3	171 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	INPP4B	O15327	924 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TLX2	O43763	284 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SCGB2A1	O75556	95 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	UBTFL1	P0CB47	393 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	FUT1	P19526	365 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ALDH3B1	P43353	468 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	MYBPC1	Q00872	1141 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	GABPB1	Q06547	395 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	MFGE8	Q08431	387 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CLPP	Q16740	277 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	QRICH1	Q2TAL8	776 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	AGK	Q53H12	422 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	BSPRY	Q5W0U4	402 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NEPRO	Q6NW34	567 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CDHR3	Q6ZTQ4	885 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	C17orf64	Q86WR6	236 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	IQCK	Q8N0W5	287 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	C8orf46	Q8TAG6	207 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SELENOM	Q8WWX9	145 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	PSMG2	Q969U7	264 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TMEM45B	Q96B21	275 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF300	Q96RE9	604 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	USP28	Q96RU2	1077 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	RAB40C	Q96S21	281 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	LITAF	Q99732	161 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	GABRG3	Q99928	467 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	STRADB	Q9C0K7	418 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	EGLN1	Q9GZT9	426 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	MED20	Q9H944	212 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SLC25A19	Q9HC21	320 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	HES2	Q9Y543	173 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ASB3	Q9Y575	518 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	AP1M2	Q9Y6Q5	423 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476		U3KQA8	63 aa		4.06	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	IQCM	A0A1B0GVH7	501 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	KPNA7	A9QM74	516 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NEDD8-MDP1	E9PL57	170 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SH2D1B	O14796	132 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF821	O75541	412 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	MTRF1	O75570	445 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CEACAM4	O75871	244 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	DIRAS3	O95661	229 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	POLR2M	P0CAP2	368 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CFC1B	P0CG36	223 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CFC1	P0CG37	223 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	RALA	P11233	206 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NCF1	P14598	390 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CD1D	P15813	335 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF26	P17031	533 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SPAM1	P38567	509 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ETV5	P41161	510 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	MTIF2	P46199	727 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NPY2R	P49146	381 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TKTL1	P51854	596 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	HSD17B7	P56937	341 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	RPL27	P61353	136 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	RPS4X	P62701	263 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CSNK1G2	P78368	415 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	PRKCE	Q02156	737 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	KLHL30	Q0D2K2	578 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NME3	Q13232	169 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF177	Q13360	481 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	DDI2	Q5TDH0	399 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	IL23R	Q5VWK5	629 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	STEAP1B	Q6NZ63	245 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	LCLAT1	Q6UWP7	414 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NOTCH2NL	Q7Z3S9	236 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	YRDC	Q86U90	279 aa	Known RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ITIH5	Q86UX2	942 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	OR4N5	Q8IXE1	308 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TEX9	Q8N6V9	391 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NUP37	Q8NFH4	326 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	SLCO2A1	Q92959	643 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	PNPLA2	Q96AD5	504 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CBWD1	Q9BRT8	395 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	IL1RAP	Q9NPH3	570 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	YAE1D1	Q9NRH1	226 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	GAB2	Q9UQC2	676 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	PIKFYVE	Q9Y2I7	2098 aa		4.05	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TRPM6	Q9BX84	2022 aa		4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476		A0A087X002	238 aa		4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476		I3L4J1	428 aa		4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476	NR5A2	O00482	541 aa		4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476	CASC3	O15234	703 aa	Known RBP	4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476	ZNF749	O43361	778 aa		4.04	□□□□□ -1.76
SSX2IP-208	ENST00000490476	TNFSF12	O43508	249 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms