RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 GSNP06396 782 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 UBTFL6P0CB48 400 aaPredicted RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 CD8BP10966 210 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 ANXA11P50995 505 aaKnown RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 TXNL4AP83876 142 aaKnown RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 SELENBP1Q13228 472 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 QPRTQ15274 297 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 GPAT3Q53EU6 434 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 FBXW10Q5XX13 1052 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 DNAJC14Q6Y2X3 702 aaPredicted RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 ZNF621Q6ZSS3 439 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 EIF3MQ7L2H7 374 aaKnown RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 GMPPAQ96IJ6 420 aaPredicted RBP17.7■□□□□ 0.42
SMC4-222ENST00000490207 C7orf26Q96N11 449 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 EMC9Q9Y3B6 208 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 MPDZO75970 2070 aa17.7■□□□□ 0.42
SMC4-222ENST00000490207 RFXANKO14593 260 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 SS18L1O75177 396 aaPredicted RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 GOSR1O95249 250 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 NTN1O95631 604 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 CGAP01215 116 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 IL6P05231 212 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 POU2F1P14859 743 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 DNAJA1P31689 397 aaKnown RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 CD79BP40259 229 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 CTBP2P56545 445 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 FAM27E3Q08E93 113 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 MAPK14Q16539 360 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 SLC25A53Q5H9E4 307 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 ZNF474Q6S9Z5 364 aaPredicted RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 OR6K3Q8NGY3 331 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 PNPT1Q8TCS8 783 aaKnown RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 ZFP90Q8TF47 636 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 DACH2Q96NX9 599 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 THUMPD3Q9BV44 507 aaKnown RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 SAP130Q9H0E3 1048 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 SDR39U1Q9NRG7 319 aaPredicted RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
SMC4-222ENST00000490207 SLC35A3Q9Y2D2 325 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 TESMINQ9Y4I5 508 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 CCDC168Q8NDH2 2452 aa17.69■□□□□ 0.42
SMC4-222ENST00000490207 PRAMEF27A3QJZ7 478 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 EFNA2O43921 213 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 H6PDO95479 791 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 KCNJ5P48544 419 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 PCYT1AP49585 367 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 CARD18P57730 90 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 ZNF239Q16600 458 aaKnown RBP17.68■□□□□ 0.42
SMC4-222ENST00000490207 EPGNQ6UW88 154 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 CDC20BQ86Y33 519 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 MIER2Q8N344 545 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 GOLGA6L1Q8N7Z2 621 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 FAM71CQ8NEG0 241 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 ATP6V1C2Q8NEY4 427 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 OR9I1Q8NGQ6 314 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 DYDC1Q8WWB3 177 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 ST8SIA1Q92185 356 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 OSTF1Q92882 214 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 CPNE4Q96A23 557 aaPredicted RBP17.68■□□□□ 0.42
SMC4-222ENST00000490207 ZNF524Q96C55 264 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 SRXN1Q9BYN0 137 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 COQ10BQ9H8M1 238 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 TIGARQ9NQ88 270 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 ELOVL5Q9NYP7 299 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 NDRG3Q9UGV2 375 aa17.68■□□□□ 0.42
SMC4-222ENST00000490207 ETV2O00321 342 aaPredicted RBP17.67■□□□□ 0.42
SMC4-222ENST00000490207 POLR3GO15318 223 aaPredicted RBP17.67■□□□□ 0.42
SMC4-222ENST00000490207 DNAJA2O60884 412 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 KRT75O95678 551 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 PGCP20142 388 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 CCKARP32238 428 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 PGM1P36871 562 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 CHRNEQ04844 493 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 SYPL1Q16563 259 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 TMEM176BQ3YBM2 270 aaPredicted RBP17.67■□□□□ 0.42
SMC4-222ENST00000490207 TIGD2Q4W5G0 525 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 C3orf33Q6P1S2 294 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 MSANTD1Q6ZTZ1 278 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 HDXQ7Z353 690 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 HMGN2P46Q86SG4 172 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 ANKFN1Q8N957 763 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 ZNF610Q8N9Z0 462 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 REXO5Q96IC2 774 aaKnown RBP17.67■□□□□ 0.42
SMC4-222ENST00000490207 SLC39A3Q9BRY0 314 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 QRSL1Q9H0R6 528 aaKnown RBP17.67■□□□□ 0.42
SMC4-222ENST00000490207 RMND5AQ9H871 391 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 SLCO1B3Q9NPD5 702 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 GLRX2Q9NS18 164 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 LIPT1Q9Y234 373 aa17.67■□□□□ 0.42
SMC4-222ENST00000490207 HMGB1P1B2RPK0 211 aaPredicted RBP17.66■□□□□ 0.42
SMC4-222ENST00000490207 ANP32DO95626 131 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 SLC7A1P30825 629 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 POLR2JP52435 117 aaKnown RBP17.66■□□□□ 0.42
SMC4-222ENST00000490207 STX1BP61266 288 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 COX20Q5RI15 118 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 GTF2IRD2BQ6EKJ0 949 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 GTF2IRD2Q86UP8 949 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 RNF128Q8TEB7 428 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 TMEM234Q8WY98 164 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms