RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ARRB1P49407 418 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RAB9AP51151 201 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 BACE1P56817 501 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C21orf59P57076 290 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SRYQ05066 204 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC20A2Q08357 652 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZP4Q12836 540 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF177Q13360 481 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ITGA9Q13797 1035 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 COTL1Q14019 142 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RCAN2Q14206 197 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MEF2DQ14814 521 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM83EQ2M2I3 478 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM74A3Q4VXF1 159 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SFT2D3Q587I9 215 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LY6G6FQ5SQ64 297 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 DMKNQ6E0U4 476 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC8B1Q6J4K2 584 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 STEAP1BQ6NZ63 245 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC25A47Q6Q0C1 308 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TMEM107Q6UX40 140 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 NLRP9Q7RTR0 991 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 P4HA3Q7Z4N8 544 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ACOT1Q86TX2 421 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 GPBP1Q86WP2 473 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SELENOHQ8IZQ5 122 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SYCE1Q8N0S2 351 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PRSS35Q8N3Z0 413 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SYT14Q8NB59 555 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 COLGALT1Q8NBJ5 622 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 OR1B1Q8NGR6 318 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 OR13C3Q8NGS6 347 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CLHC1Q8NHS4 586 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 DNAAF4Q8WXU2 420 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 NTNG2Q96CW9 530 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CERS2Q96G23 380 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 AKR1E2Q96JD6 320 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 HINT2Q9BX68 163 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 DUSP16Q9BY84 665 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 EGLN3Q9H6Z9 239 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PARVGQ9HBI0 331 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 GDF3Q9NR23 364 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SDR39U1Q9NRG7 319 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FGF21Q9NSA1 209 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 IL36GQ9NZH8 169 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ENPP5Q9UJA9 477 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ANAPC7Q9UJX3 599 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 IKZF3Q9UKT9 509 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RASD1Q9Y272 281 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RBMX2Q9Y388 322 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 WDR45Q9Y484 360 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C5P01031 1676 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF831Q5JPB2 1677 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TAF1P21675 1872 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 KDM3BQ7LBC6 1761 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 IL16Q14005 1332 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 A0A0G2JNG1 304 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TRBV4-1A0A0J9YWV2 114 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 A0A1B0GUH1 482 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 A0A1B0GVY2 172 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LOC390937A0A1W2PQ73 354 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C9JVG2 144 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF587BE7ETH6 402 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ARPC1BO15143 372 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TSPAN2O60636 221 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LMX1BO60663 402 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 GLRA3O75311 464 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 NIPSNAP2O75323 286 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TRIM3O75382 744 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 KHDRBS3O75525 346 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RFPL2O75678 378 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CABYRO75952 493 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 OR2J3O76001 311 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ERCC1P07992 297 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM106CPP0CH98 169 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 DBTP11182 482 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ANXA3P12429 323 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 POLR2CP19387 275 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 EPHA2P29317 976 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 OXTRP30559 389 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 KLC1Q07866 573 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ARL16Q0P5N6 197 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF234Q14588 700 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 KIR2DS5Q14953 304 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C3AR1Q16581 482 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 AGAP7PQ5VUJ5 663 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ERICH5Q6P6B1 374 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM171BQ6P995 826 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CCDC137Q6PK04 289 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 UNQ6126/PRO20091Q6UXV3 157 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MBOAT1Q6ZNC8 495 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LANCL3Q6ZV70 420 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ASB18Q6ZVZ8 466 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 Q71RC1 249 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CCDC80Q76M96 950 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ASCL5Q7RTU5 278 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LINC00523Q86TU6 105 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TRIM69Q86WT6 500 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CATSPERDQ86XM0 798 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 RCOR2Q8IZ40 523 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms