RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 P2RX1P51575 399 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 RRADP55042 308 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 SUMO3P55854 103 aaPredicted RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 ADARB1P78563 741 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 C17orf67Q0P5P2 114 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 Q0VFX4 171 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 FOXC1Q12948 553 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 AIMP2Q13155 320 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 CBFBQ13951 182 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ZNF791Q3KP31 576 aaPredicted RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 ELOA3BQ3SY89 546 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ACER2Q5QJU3 275 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 DCAF10Q5QP82 559 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 CBLN3Q6UW01 205 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 IL20RBQ6UXL0 311 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 NKAIN4Q8IVV8 208 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 NRMQ8IXM6 262 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 CDK20Q8IZL9 346 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 C8orf59Q8N0T1 100 aaPredicted RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 ARMC10Q8N2F6 343 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 PARP8Q8N3A8 854 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 MARVELD2Q8N4S9 558 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 SETD9Q8NE22 299 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ELOA3Q8NG57 546 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 OR5W2Q8NH69 310 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 BRIX1Q8TDN6 353 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 GNPDA2Q8TDQ7 276 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 TMEM239Q8WW34 195 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 NR1H4Q96RI1 486 aaPredicted RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 SECISBP2Q96T21 854 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 GABARAPL3Q9BY60 117 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 PPP4R1LQ9P1A2 415 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 TMEM5Q9Y2B1 443 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 MED31Q9Y3C7 131 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 LOC100130705A0A1B0GUX0 176 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 TRABD2BA6NFA1 517 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 FAM47E-STBD1D6RA91 191 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 H3BN98 237 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 KPNA4O00629 521 aaPredicted RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 GNB5O14775 395 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 PIP5K1CO60331 668 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 MAN1A2O60476 641 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 LYPD3O95274 346 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 GNAO1P09471 354 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 PTNP21246 168 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 FPR3P25089 353 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 POU1F1P28069 291 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 CASRP41180 1078 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 SLC1A3P43003 542 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 RPS6KA3P51812 740 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 ESRRGP62508 458 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 COX10Q12887 443 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 NPRL3Q12980 569 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 SNTA1Q13424 505 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 IL18R1Q13478 541 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 KEAP1Q14145 624 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 MEP1AQ16819 746 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 COL28A1Q2UY09 1125 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 TBC1D25Q3MII6 688 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 ABHD17BQ5VST6 288 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 BICRALQ6AI39 1079 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 TTC33Q6PID6 262 aaPredicted RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 KLHL17Q6TDP4 642 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 RTL4Q6ZR62 310 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 RNF113BQ8IZP6 322 aaKnown RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 DUSP19Q8WTR2 217 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 THAP4Q8WY91 577 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 C3orf49Q96BT1 292 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 FAM46AQ96IP4 442 aaKnown RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 CCNL2Q96S94 520 aaPredicted RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 APOL4Q9BPW4 351 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 PRSS27Q9BQR3 290 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 RTN4RQ9BZR6 473 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 LHPPQ9H008 270 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 ING2Q9H160 280 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 GALNT9Q9HCQ5 603 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 PNPLA3Q9NST1 481 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 CNIH4Q9P003 139 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 KLK13Q9UKR3 277 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 ICAM5Q9UMF0 924 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 GMPPBQ9Y5P6 360 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 WIF1Q9Y5W5 379 aa9.15□□□□□ -0.94
USP11-211ENST00000489111 CHCHD2Q9Y6H1 151 aaPredicted RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 RIF1Q5UIP0 2472 aaKnown RBP9.15□□□□□ -0.94
USP11-211ENST00000489111 ANKUB1A6NFN9 424 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 SLC16A6O15403 523 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 CDC40O60508 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP11-211ENST00000489111 SOX14O95416 240 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 NTN1O95631 604 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 CLIC3O95833 236 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 PRKAR1AP10644 381 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 IFI30P13284 250 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 OSMP13725 252 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 MSX1P28360 303 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 CASP3P42574 277 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 GPR4P46093 362 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms