RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PROCRQ9UNN8 238 aa15.9■□□□□ 0.14
ITGB1-215ENST00000488494 EMC9Q9Y3B6 208 aa15.9■□□□□ 0.14
ITGB1-215ENST00000488494 TESMINQ9Y4I5 508 aa15.9■□□□□ 0.14
ITGB1-215ENST00000488494 USH1CQ9Y6N9 552 aa15.9■□□□□ 0.14
ITGB1-215ENST00000488494 SPG11Q96JI7 2443 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 HMGN4O00479 90 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 EFNA2O43921 213 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 SS18L1O75177 396 aaPredicted RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 NTN1O95631 604 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 CGAP01215 116 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 CD8BP10966 210 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 ADH6P28332 368 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 DNAJA1P31689 397 aaKnown RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 CD79BP40259 229 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 FAM27E3Q08E93 113 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 LRRC74AQ0VAA2 488 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 SELENBP1Q13228 472 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF239Q16600 458 aaKnown RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 GSTA3Q16772 222 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 TIGD2Q4W5G0 525 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 GPAT3Q53EU6 434 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF621Q6ZSS3 439 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 EIF3MQ7L2H7 374 aaKnown RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 CDC20BQ86Y33 519 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF619Q8N2I2 560 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 LRRC8CQ8TDW0 803 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 GMPPAQ96IJ6 420 aaPredicted RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 C7orf26Q96N11 449 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 DACH2Q96NX9 599 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 SRXN1Q9BYN0 137 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 LAT2Q9GZY6 243 aa15.89■□□□□ 0.13
ITGB1-215ENST00000488494 SDR39U1Q9NRG7 319 aaPredicted RBP15.89■□□□□ 0.13
ITGB1-215ENST00000488494 TEP1Q99973 2627 aaKnown RBP15.88■□□□□ 0.13
ITGB1-215ENST00000488494 HIVEP1P15822 2718 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 GJE1A6NN92 205 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 RFXANKO14593 260 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 UBDO15205 165 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 BCAS1O75363 584 aaPredicted RBP15.88■□□□□ 0.13
ITGB1-215ENST00000488494 H6PDO95479 791 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 IL6P05231 212 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 GUSBP08236 651 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 KCNJ5P48544 419 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 ANXA11P50995 505 aaKnown RBP15.88■□□□□ 0.13
ITGB1-215ENST00000488494 CTBP2P56545 445 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 CARD18P57730 90 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 POU4F3Q15319 338 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 COX20Q5RI15 118 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 ANKFN1Q8N957 763 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 FAM71CQ8NEG0 241 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 OR9I1Q8NGQ6 314 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 OR6K3Q8NGY3 331 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 ZFP90Q8TF47 636 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 OSTF1Q92882 214 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 SLC39A3Q9BRY0 314 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 THUMPD3Q9BV44 507 aaKnown RBP15.88■□□□□ 0.13
ITGB1-215ENST00000488494 QRSL1Q9H0R6 528 aaKnown RBP15.88■□□□□ 0.13
ITGB1-215ENST00000488494 LIME1Q9H400 295 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 COQ10BQ9H8M1 238 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 SLCO1B3Q9NPD5 702 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 SLC6A13Q9NSD5 602 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 ZIM2Q9NZV7 527 aa15.88■□□□□ 0.13
ITGB1-215ENST00000488494 ETV2O00321 342 aaPredicted RBP15.87■□□□□ 0.13
ITGB1-215ENST00000488494 CHRM4P08173 479 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 POU2F1P14859 743 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 SLC7A1P30825 629 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 UGT2B10P36537 528 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 CHRNEQ04844 493 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 TESK1Q15569 626 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 SYPL1Q16563 259 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 EXOC3L2Q2M3D2 409 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 TMEM176BQ3YBM2 270 aaPredicted RBP15.87■□□□□ 0.13
ITGB1-215ENST00000488494 SLC25A53Q5H9E4 307 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 C3orf33Q6P1S2 294 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 MIER2Q8N344 545 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF610Q8N9Z0 462 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 RNF128Q8TEB7 428 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 ABHD3Q8WU67 409 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 OIT3Q8WWZ8 545 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 ROBO4Q8WZ75 1007 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 CPNE4Q96A23 557 aaPredicted RBP15.87■□□□□ 0.13
ITGB1-215ENST00000488494 TRNT1Q96Q11 434 aaKnown RBP15.87■□□□□ 0.13
ITGB1-215ENST00000488494 SAP130Q9H0E3 1048 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 TIGARQ9NQ88 270 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 KLHL28Q9NXS3 571 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 NDRG3Q9UGV2 375 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 ST6GALNAC2Q9UJ37 374 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 SLC35A3Q9Y2D2 325 aa15.87■□□□□ 0.13
ITGB1-215ENST00000488494 CLDN24A6NM45 220 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 DNAJA2O60884 412 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 NID1P14543 1247 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 PGCP20142 388 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 AGTR1P30556 359 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 PGM1P36871 562 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 TXNL4AP83876 142 aaKnown RBP15.86■□□□□ 0.13
ITGB1-215ENST00000488494 PLAURQ03405 335 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 MERTKQ12866 999 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 EPGNQ6UW88 154 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 MSANTD1Q6ZTZ1 278 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 GOLGA6L1Q8N7Z2 621 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms