RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 PRG2P13727 222 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 NDUFV2P19404 249 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 ITGB8P26012 769 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 SLC7A9P82251 487 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 TMEM215Q68D42 235 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 OR51A7Q8NH64 312 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 OR52I2Q8NH67 350 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 PFN4Q8NHR9 129 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 ZNF707Q96C28 371 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-214ENST00000488128 PDCD1LG2Q9BQ51 273 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 MS4A8Q9BY19 250 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 FKTNO75072 461 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 UBL3O95164 117 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 SPDEFO95238 335 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 CSF2RAP15509 400 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
COL16A1-214ENST00000488128 DEFA5Q01523 94 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 TGM3Q08188 693 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 CAMK1Q14012 370 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 LTB4RQ15722 352 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 C18orf63Q68DL7 685 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 GDF7Q7Z4P5 450 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 ZNF547Q8IVP9 402 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 LMLNQ96KR4 655 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 OR14A2Q96R54 314 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 C19orf43Q9BQ61 176 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 NDC1Q9BTX1 674 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 OR52D1Q9H346 318 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 PRKAG2Q9UGJ0 569 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 SESN1Q9Y6P5 492 aa13.18□□□□□ -0.3
COL16A1-214ENST00000488128 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 TEAD1P28347 426 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 MC3RP41968 323 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 RPL35P42766 123 aaKnown RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 FNTBP49356 437 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 MMP15P51511 669 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 KLF9Q13886 244 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 FGD2Q7Z6J4 655 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 UBE3DQ7Z6J8 389 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 MRGPREQ86SM8 312 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 SUN3Q8TAQ9 357 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 CPEB1Q9BZB8 566 aaKnown RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 SLC35C2Q9NQQ7 365 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 KHDRBS3O75525 346 aaKnown RBP13.17□□□□□ -0.3
COL16A1-214ENST00000488128 FGF18O76093 207 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 TPPPO94811 219 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 NFATC1O95644 943 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 ADH7P40394 386 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 THSD4Q6ZMP0 1018 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 ZNF793Q6ZN11 406 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 NUDT13Q86X67 352 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 CACUL1Q86Y37 369 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 SLC41A3Q96GZ6 507 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 PEX11GQ96HA9 241 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 SLC38A1Q9H2H9 487 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 XKR8Q9H6D3 395 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 HCFC2Q9Y5Z7 792 aa13.17□□□□□ -0.3
COL16A1-214ENST00000488128 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 SCAMP1O15126 338 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 GRM6O15303 877 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 LATO43561 262 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 ZIC2O95409 532 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-214ENST00000488128 CXCL14O95715 111 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 MT-ND5P03915 603 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 EPXP11678 715 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 LAG3P18627 525 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 DCTDP32321 178 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 CCR9P51686 369 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 TCEA2Q15560 299 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 RPE65Q16518 533 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 C2orf68Q2NKX9 166 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
COL16A1-214ENST00000488128 HDDC2Q7Z4H3 204 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 OR5M1Q8NGP8 315 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 ACOT11Q8WXI4 607 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-214ENST00000488128 RAD51AP1Q96B01 352 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 CNRIP1Q96F85 164 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-214ENST00000488128 SPATA5L1Q9BVQ7 753 aa13.16□□□□□ -0.3
COL16A1-214ENST00000488128 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms