RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SFXN5Q8TD22 340 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 AKAP1Q92667 903 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS16-208ENST00000487461 TUBGCP3Q96CW5 907 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 DUSP26Q9BV47 211 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 BHLHE41Q9C0J9 482 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 KLHL13Q9P2N7 655 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 KCNE5Q9UJ90 142 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 ING1Q9UK53 422 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 JMJD1CQ15652 2540 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 IGHV3-15A0A0B4J1V0 119 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ZNF814B7Z6K7 855 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ZNF264O43296 627 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 EIF4E2O60573 245 aaKnown RBP10.84□□□□□ -0.67
VPS16-208ENST00000487461 FCMRO60667 390 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ADAP00813 363 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 MATN1P21941 496 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 CLDN8P56748 225 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 C21orf58P58505 322 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 RPS26P62854 115 aaKnown RBP10.84□□□□□ -0.67
VPS16-208ENST00000487461 EMX2Q04743 252 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 CAPRIN1Q14444 709 aaKnown RBP10.84□□□□□ -0.67
VPS16-208ENST00000487461 PGS1Q32NB8 556 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 SFRP5Q5T4F7 317 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 OLIG3Q7RTU3 272 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 C6orf120Q7Z4R8 191 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ZFP90Q8TF47 636 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 TMEM171Q8WVE6 324 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 MOAP1Q96BY2 351 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 MRGPRX4Q96LA9 322 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ROPN1BQ9BZX4 212 aaPredicted RBP10.84□□□□□ -0.67
VPS16-208ENST00000487461 SERHL2Q9H4I8 314 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 ROPN1Q9HAT0 212 aaPredicted RBP10.84□□□□□ -0.67
VPS16-208ENST00000487461 GP6Q9HCN6 339 aa10.84□□□□□ -0.67
VPS16-208ENST00000487461 CENPVL1A0A0U1RR11 272 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 SERINC4A6NH21 518 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 C9JVG2 144 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
VPS16-208ENST00000487461 ITM2AO43736 263 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 TYROBPO43914 113 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 DNAJA2O60884 412 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 TMCC2O75069 709 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 UBL4AP11441 157 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 IL32P24001 234 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 PCSK6P29122 969 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 SOAT1P35610 550 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ETV4P43268 484 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ATP5J2P56134 94 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 RAC3P60763 192 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 VSNL1P62760 191 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 IFFO1Q0D2I5 559 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 CBFBQ13951 182 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 QPRTQ15274 297 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 GPR68Q15743 365 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 TAB1Q15750 504 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ZNF141Q15928 474 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 OR4F3Q6IEY1 312 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 PRIMA1Q86XR5 153 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 CLECL1Q8IZS7 167 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ZNF619Q8N2I2 560 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 SLC43A2Q8N370 569 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 TOR1AIP2Q8NFQ8 470 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
VPS16-208ENST00000487461 TACO1Q9BSH4 297 aaKnown RBP10.83□□□□□ -0.68
VPS16-208ENST00000487461 THUMPD3Q9BV44 507 aaKnown RBP10.83□□□□□ -0.68
VPS16-208ENST00000487461 NMUR2Q9GZQ4 415 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 LAT2Q9GZY6 243 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 QRSL1Q9H0R6 528 aaKnown RBP10.83□□□□□ -0.68
VPS16-208ENST00000487461 CXorf56Q9H5V9 222 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 BCO1Q9HAY6 547 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 LAMP3Q9UQV4 416 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 HIVEP2P31629 2446 aa10.83□□□□□ -0.68
VPS16-208ENST00000487461 DUXAA6NLW8 204 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 UGT2B17O75795 530 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 CYP7B1O75881 506 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 H6PDO95479 791 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 EDNRAP25101 427 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 SLC7A1P30825 629 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 CCR4P51679 360 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 CASP9P55211 416 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 SESN3P58005 492 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 PHC1P78364 1004 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 SELENBP1Q13228 472 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 SKP2Q13309 424 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 ITGADQ13349 1161 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 P2RY6Q15077 328 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 ARHGAP11BQ3KRB8 267 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 TIGD2Q4W5G0 525 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 BHLHB9Q6PI77 547 aa10.82□□□□□ -0.68
VPS16-208ENST00000487461 BHLHA15Q7RTS1 189 aaPredicted RBP10.82□□□□□ -0.68
VPS16-208ENST00000487461 ATG4DQ86TL0 474 aaPredicted RBP10.82□□□□□ -0.68
VPS16-208ENST00000487461 TMCO5AQ8N6Q1 288 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms