RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CCDC126Q96EE4 140 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 PDLIM5Q96HC4 596 aaKnown RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 RSPO3Q9BXY4 272 aaPredicted RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 ZNF385DQ9H6B1 395 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 DCLRE1BQ9H816 532 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 CPSF2Q9P2I0 782 aaKnown RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 KLHL13Q9P2N7 655 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 ZNF639Q9UID6 485 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 CFL2Q9Y281 166 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 VWA7Q9Y334 891 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 ASB4Q9Y574 426 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 GLOD5A6NK44 160 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 CXCL13O43927 109 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 WDR47O94967 919 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 ANP32DO95626 131 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 CHRNGP07510 517 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 HNMTP50135 292 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 PGGT1BP53609 377 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 SLC12A2P55011 1212 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 PHC1P78364 1004 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 BTKQ06187 659 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 GALNT1Q10472 559 aaPredicted RBP10.2□□□□□ -0.78
TRIM56-204ENST00000487252 ACAP2Q15057 778 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 FAM83EQ2M2I3 478 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 SLC9B1Q4ZJI4 515 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 PPP4R4Q6NUP7 873 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 RHOUQ7L0Q8 258 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 RNF128Q8TEB7 428 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 MCUR1Q96AQ8 359 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 LRRC58Q96CX6 371 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 C1GALT1C1Q96EU7 318 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF717Q9BY31 904 aaPredicted RBP10.2□□□□□ -0.78
TRIM56-204ENST00000487252 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 MYNNQ9NPC7 610 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 LYARQ9NX58 379 aaKnown RBP10.2□□□□□ -0.78
TRIM56-204ENST00000487252 PPP4R1LQ9P1A2 415 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 MCM8Q9UJA3 840 aa10.2□□□□□ -0.78
TRIM56-204ENST00000487252 GPR55Q9Y2T6 319 aaPredicted RBP10.2□□□□□ -0.78
TRIM56-204ENST00000487252 LOC105371242A0A075B767 164 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ENTPD5O75356 428 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 SYNGR4O95473 234 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 MSMBP08118 114 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 NR2F6P10588 404 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF17P17021 662 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 GGT1P19440 569 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 PRTN3P24158 256 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ARFIP1P53367 373 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 KLF10Q13118 480 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF460Q14592 562 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 C18orf21Q32NC0 220 aaPredicted RBP10.19□□□□□ -0.78
TRIM56-204ENST00000487252 TRMT5Q32P41 509 aaKnown RBP10.19□□□□□ -0.78
TRIM56-204ENST00000487252 CFAP157Q5JU67 520 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 TMEM201Q5SNT2 666 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 SH2D4BQ5SQS7 431 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 KHDRBS2Q5VWX1 349 aaKnown RBP10.19□□□□□ -0.78
TRIM56-204ENST00000487252 FAM45BPQ6NSW5 357 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 C1QL2Q7Z5L3 287 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 TUSC5Q8IXB3 177 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ADCY4Q8NFM4 1077 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 FAM45AQ8TCE6 357 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ABHD3Q8WU67 409 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 WDR60Q8WVS4 1066 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ZBTB8AQ96BR9 441 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 FBXO17Q96EF6 278 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 MAELQ96JY0 434 aaKnown RBP10.19□□□□□ -0.78
TRIM56-204ENST00000487252 ADOQ96SZ5 270 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 EFCAB11Q9BUY7 163 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 TCF7L2Q9NQB0 619 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 MED11Q9P086 117 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 PPIAL4AQ9Y536 164 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 LRRC42Q9Y546 428 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 MMP24Q9Y5R2 645 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
TRIM56-204ENST00000487252 A8MT66 165 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 SAP18O00422 153 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 PLPP1O14494 284 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 PGRMC2O15173 223 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 TMPRSS11DO60235 418 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 CCNT2O60583 730 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 REM1O75628 298 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 CBX7O95931 251 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 BCL10O95999 233 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 PNPP00491 289 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 TGFB1P01137 390 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 COX4I1P13073 169 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 EMDP50402 254 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 CCNIQ14094 377 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 EFR3AQ14156 821 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 RNPS1Q15287 305 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 PRICKLE4Q2TBC4 344 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 KPRPQ5T749 579 aaPredicted RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 KLC3Q6P597 504 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 KLHL17Q6TDP4 642 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 SLC22A9Q8IVM8 553 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 KIRREL3Q8IZU9 778 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF786Q8N393 782 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms