RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 EIF4E2O60573 245 aaKnown RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 PRKCAP17252 672 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 DNAJA1P31689 397 aaKnown RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 SUMO3P55854 103 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 CHRNEQ04844 493 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF141Q15928 474 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 SYPL1Q16563 259 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 CTU2Q2VPK5 515 aaKnown RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 PDCD4Q53EL6 469 aaKnown RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 COX20Q5RI15 118 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 HEPHL1Q6MZM0 1159 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF474Q6S9Z5 364 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF619Q8N2I2 560 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ANKFN1Q8N957 763 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 GLB1L3Q8NCI6 653 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 MIPOL1Q8TD10 442 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF524Q96C55 264 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZC3HAV1LQ96H79 300 aaKnown RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 SLC39A3Q9BRY0 314 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF350Q9GZX5 532 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 LAT2Q9GZY6 243 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 C12orf49Q9H741 205 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 SLCO1B3Q9NPD5 702 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 PAQR5Q9NXK6 330 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 KLHL28Q9NXS3 571 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 GPC6Q9Y625 555 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-204ENST00000486023 IGHV3-15A0A0B4J1V0 119 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 A0A1W2PNR3 127 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 GJE1A6NN92 205 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 HMGN4O00479 90 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 KLF11O14901 512 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 H6PDO95479 791 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 IL6P05231 212 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 SLC7A1P30825 629 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 CD79BP40259 229 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 FUT5Q11128 374 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 DAZAP2Q15038 168 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-204ENST00000486023 GSTA3Q16772 222 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 TIGD2Q4W5G0 525 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 HDXQ7Z353 690 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF550Q7Z398 422 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 ANKHD1Q8IWZ3 2542 aaKnown RBP15.81■□□□□ 0.12
COL6A1-204ENST00000486023 MIER2Q8N344 545 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 OR9I1Q8NGQ6 314 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF563Q8TA94 476 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 VPS33AQ96AX1 596 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 DNAJA3Q96EY1 480 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 SPG11Q96JI7 2443 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 MAELQ96JY0 434 aaKnown RBP15.81■□□□□ 0.12
COL6A1-204ENST00000486023 TIGARQ9NQ88 270 aa15.81■□□□□ 0.12
COL6A1-204ENST00000486023 ARGLU1Q9NWB6 273 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-204ENST00000486023 ANKRD17O75179 2603 aaKnown RBP15.81■□□□□ 0.12
COL6A1-204ENST00000486023 PRAMEF27A3QJZ7 478 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 CLDN24A6NM45 220 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 KIAA0513O60268 411 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 BCAS1O75363 584 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 NR2F1P10589 423 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 ADH6P28332 368 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 CRATP43155 626 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 ANXA11P50995 505 aaKnown RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 POLR2JP52435 117 aaKnown RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 ART1P52961 327 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 MERTKQ12866 999 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 SKP2Q13309 424 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 FGFBP1Q14512 234 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 C6orf10Q5SRN2 563 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 GTF2IRD2BQ6EKJ0 949 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 EPGNQ6UW88 154 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 FRRS1Q6ZNA5 592 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 GTF2IRD2Q86UP8 949 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 GMPPAQ96IJ6 420 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 MRGPRX4Q96LA9 322 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 DACH2Q96NX9 599 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 WFIKKN1Q96NZ8 548 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 MED18Q9BUE0 208 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 SRXN1Q9BYN0 137 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 SLC6A13Q9NSD5 602 aa15.8■□□□□ 0.12
COL6A1-204ENST00000486023 CCM2LQ9NUG4 571 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 C6orf203Q9P0P8 240 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-204ENST00000486023 POLR3GO15318 223 aaPredicted RBP15.79■□□□□ 0.12
COL6A1-204ENST00000486023 NTN1O95631 604 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 KRT75O95678 551 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 CGAP01215 116 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 TFPIP10646 304 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 CD8BP10966 210 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 PGCP20142 388 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 CCNA2P20248 432 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ELK4P28324 431 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 IST1P53990 364 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 SESN3P58005 492 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 STX1BP61266 288 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 KCNJ10P78508 379 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 LRRC74AQ0VAA2 488 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 GTDC1Q4AE62 458 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ALKBH2Q6NS38 261 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ZFP90Q8TF47 636 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ABHD3Q8WU67 409 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 THOC1Q96FV9 657 aaKnown RBP15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ITCHQ96J02 903 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms