RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	NTHL1	P78549	312 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	NCBP1	Q09161	790 aa	Known RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ELAVL2	Q12926	359 aa	Known RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	CHIT1	Q13231	466 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	TFDP1	Q14186	410 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	RAB35	Q15286	201 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	C2CD6	Q53TS8	623 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	LINC00242	Q5T6M2	205 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	WDR25	Q64LD2	544 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	BTNL3	Q6UXE8	466 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	GCNT7	Q6ZNI0	430 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ANKRD37	Q7Z713	158 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	LRRC49	Q8IUZ0	686 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	IL1F10	Q8WWZ1	152 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	SHC3	Q92529	594 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ART4	Q93070	314 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	SDSL	Q96GA7	329 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	POM121L2	Q96KW2	1035 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	C4orf36	Q96KX1	117 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	CHCHD5	Q9BSY4	110 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ZSCAN5A	Q9BUG6	496 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ST6GALNAC5	Q9BVH7	336 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	PNN	Q9H307	717 aa	Known RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	TUBB1	Q9H4B7	451 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	IL1RL2	Q9HB29	575 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	AMBN	Q9NP70	447 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ESM1	Q9NQ30	184 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	AIPL1	Q9NZN9	384 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	RAI14	Q9P0K7	980 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	CYTH4	Q9UIA0	394 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	FBXO7	Q9Y3I1	522 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	GMPPB	Q9Y5P6	360 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	MAD1L1	Q9Y6D9	718 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	TAF1L	Q8IZX4	1826 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	TTC21B	Q7Z4L5	1316 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	SCN7A	Q01118	1682 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	POLQ	O75417	2590 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ALPK3	Q96L96	1907 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	MYH15	Q9Y2K3	1946 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CEP250	Q9BV73	2442 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TRIM64C	A6NLI5	447 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024		A8MXK9	166 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024		H3BMH7	237 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CASK	O14936	926 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CTAGE5	O15320	804 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TM9SF1	O15321	606 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	NUDT21	O43809	227 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SNAP91	O60641	907 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TRIM3	O75382	744 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF821	O75541	412 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	STX11	O75558	287 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SCGN	O76038	276 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	MBD3	O95983	291 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	OAS1	P00973	400 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CCDC159	P0C7I6	412 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	DBT	P11182	482 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ANXA3	P12429	323 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	MFAP2	P55001	183 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	NDUFV3	P56181	108 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	BDH1	Q02338	343 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ACY1	Q03154	408 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SELPLG	Q14242	412 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SLC1A5	Q15758	541 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CCDC152	Q4G0S7	254 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM225	Q6GV28	225 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ARMCX5	Q6P1M9	558 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF613	Q6PF04	617 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	METTL7B	Q6UX53	244 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	RPAIN	Q86UA6	219 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM17	Q86X19	198 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CCDC71	Q8IV32	467 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF683	Q8IZ20	524 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024		Q8NBF4	154 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	AQP11	Q8NBQ7	271 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF414	Q96IQ9	312 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	C7orf34	Q96L11	122 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	C9orf85	Q96MD7	179 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	PRICKLE1	Q96MT3	831 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	CASD1	Q96PB1	797 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	TESK2	Q96S53	571 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	LIME1	Q9H400	295 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	GORASP2	Q9H8Y8	452 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	JPT2	Q9H910	190 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	MRPL39	Q9NYK5	338 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	HPCAL4	Q9UM19	191 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	RPH3AL	Q9UNE2	315 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SMC3	Q9UQE7	1217 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	MRPS33	Q9Y291	106 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	RRP15	Q9Y3B9	282 aa	Known RBP	3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	SLCO1B1	Q9Y6L6	691 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	BCOR	Q6W2J9	1755 aa		3.17	□□□□□ -1.9
VPS8-223	ENST00000485024	KDR	P35968	1356 aa		3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	DLEC1	Q9Y238	1755 aa		3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	MEX3A	A1L020	520 aa	Known RBP	3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	NDUFAF8	A1L188	74 aa		3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	NPIPA7	E9PJI5	369 aa		3.16	□□□□□ -1.9
VPS8-223	ENST00000485024		K7EQG2	157 aa		3.16	□□□□□ -1.9
VPS8-223	ENST00000485024	PPIH	O43447	177 aa	Known RBP	3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms