RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CPNE4Q96A23 557 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 MSI2Q96DH6 328 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 FAM120BQ96EK7 910 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 REXO5Q96IC2 774 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 C16orf45Q96MC5 204 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 BTBD2Q9BX70 525 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 POTEKPQ9BYX7 375 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 TRIM2Q9C040 744 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 ALG2Q9H553 416 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 GP6Q9HCN6 339 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 SIRT3Q9NTG7 399 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 ACSS1Q9NUB1 689 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 GIN1Q9NXP7 522 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 SH3BP4Q9P0V3 963 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 TBK1Q9UHD2 729 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 DCDC2Q9UHG0 476 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 BAIAP2L1Q9UHR4 511 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 SNX8Q9Y5X2 465 aa8.34□□□□□ -1.07
SMARCE1-210ENST00000481231 IGHV3-15A0A0B4J1V0 119 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 NPIPA5A0A0B4J1W7 369 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 A0A1W2PPM1 405 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 DPRXA6NFQ7 191 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZNF814B7Z6K7 855 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 NPIPA7E9PJI5 369 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 SLC28A1O00337 649 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZNF195O14628 629 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 RGS14O43566 566 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 PLIN3O60664 434 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 PRKD3O94806 890 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 VENTXO95231 258 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 HSPA4LO95757 839 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 HMGN2P05204 90 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 YES1P07947 543 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 NPIPA8P0DM63 369 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 CREB1P16220 341 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 SLC25A16P16260 332 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ENPP1P22413 925 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 EDNRAP25101 427 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 NAA20P61599 178 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 RPL38P63173 70 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 POU6F2P78424 691 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ITGADQ13349 1161 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 LASP1Q14847 261 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 TOMM34Q15785 309 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 NRF1Q16656 503 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 KLHL26Q53HC5 615 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 PRR31Q5SQ13 230 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZCCHC12Q6PEW1 402 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 Q6ZSR9 355 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 BHLHA15Q7RTS1 189 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 TDRPQ86YL5 185 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 MNS1Q8NEH6 495 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ATP6V1C2Q8NEY4 427 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 PHOSPHO1Q8TCT1 267 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 CDS1Q92903 461 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZNF524Q96C55 264 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 TUBB1Q9H4B7 451 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 DUSP22Q9NRW4 184 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZCCHC3Q9NUD5 404 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ING1Q9UK53 422 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ICAM5Q9UMF0 924 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 CARD8Q9Y2G2 431 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ZNF281Q9Y2X9 895 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 ACTL7BQ9Y614 415 aa8.33□□□□□ -1.08
SMARCE1-210ENST00000481231 MALRD1Q5VYJ5 2156 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 GJE1A6NN92 205 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 SHISA9B4DS77 424 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 NPIPB9F8W1W9 429 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 KIF2AO00139 706 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 AZIN1O14977 448 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 LSM1O15116 133 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 RAMP1O60894 148 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 GLRA3O75311 464 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 LYZL6O75951 148 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 NUDT14O95848 222 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 FAM153BP0C7A2 387 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 NEFHP12036 1026 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 BCKDHAP12694 445 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 PRKCAP17252 672 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 ATP6V1C1P21283 382 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 USF1P22415 310 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 OR3A2P47893 321 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 COMPP49747 757 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 GZMKP49863 264 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 CDH11P55287 796 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 SUMO3P55854 103 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 C21orf58P58505 322 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 LSM11P83369 360 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 STK11Q15831 433 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 NDUFAF6Q330K2 333 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 FAM153CQ494X1 144 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 RFTN2Q52LD8 501 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 LRIG3Q6UXM1 1119 aa8.32□□□□□ -1.08
SMARCE1-210ENST00000481231 Q6ZT83 130 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms