RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CYR61O00622 381 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 BHLHE40O14503 412 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 RDH16O75452 317 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 IGHA1P01876 353 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 NGFRP08138 427 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 SAGP10523 405 aaPredicted RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 TFPIP10646 304 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 TPMTP51580 245 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 AGFG1P52594 562 aaKnown RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 SLC3A1Q07837 685 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 ARL9Q6T311 187 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 SLC22A18ASQ8N1D0 253 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 ZNF619Q8N2I2 560 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 CADM2Q8N3J6 435 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 SLC37A3Q8NCC5 494 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 KISS1RQ969F8 398 aaPredicted RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 RFKQ969G6 155 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 ALG8Q9BVK2 526 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 FLRT3Q9NZU0 649 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 CLEC1BQ9P126 229 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 PHF11Q9UIL8 331 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 DTX4Q9Y2E6 619 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 TICRRQ7Z2Z1 1910 aa10□□□□□ -0.81
VPS52-217ENST00000478934 A0A0B4J203 849 aa10□□□□□ -0.81
VPS52-217ENST00000478934 TRAPPC13A5PLN9 417 aa10□□□□□ -0.81
VPS52-217ENST00000478934 GTPBP1O00178 669 aaKnown RBP10□□□□□ -0.81
VPS52-217ENST00000478934 LYRM1O43325 122 aa10□□□□□ -0.81
VPS52-217ENST00000478934 PLOD3O60568 738 aa10□□□□□ -0.81
VPS52-217ENST00000478934 KCNJ13O60928 360 aa10□□□□□ -0.81
VPS52-217ENST00000478934 STX11O75558 287 aa10□□□□□ -0.81
VPS52-217ENST00000478934 IGKV1D-16P01601 117 aa10□□□□□ -0.81
VPS52-217ENST00000478934 TLX1P31314 330 aaPredicted RBP10□□□□□ -0.81
VPS52-217ENST00000478934 FGF9P31371 208 aaPredicted RBP10□□□□□ -0.81
VPS52-217ENST00000478934 ACVR1BP36896 505 aa10□□□□□ -0.81
VPS52-217ENST00000478934 INPP1P49441 399 aa10□□□□□ -0.81
VPS52-217ENST00000478934 SRP9P49458 86 aaKnown RBP10□□□□□ -0.81
VPS52-217ENST00000478934 EVX1P49640 407 aa10□□□□□ -0.81
VPS52-217ENST00000478934 FAM53BQ14153 422 aa10□□□□□ -0.81
VPS52-217ENST00000478934 EFR3AQ14156 821 aa10□□□□□ -0.81
VPS52-217ENST00000478934 KIR2DS3Q14952 304 aa10□□□□□ -0.81
VPS52-217ENST00000478934 PRICKLE4Q2TBC4 344 aa10□□□□□ -0.81
VPS52-217ENST00000478934 NIPAL3Q6P499 406 aa10□□□□□ -0.81
VPS52-217ENST00000478934 SSX6Q7RTT6 188 aa10□□□□□ -0.81
VPS52-217ENST00000478934 C17orf47Q8NEP4 570 aa10□□□□□ -0.81
VPS52-217ENST00000478934 OR9A4Q8NGU2 314 aa10□□□□□ -0.81
VPS52-217ENST00000478934 AP3S1Q92572 193 aa10□□□□□ -0.81
VPS52-217ENST00000478934 BPIFA2Q96DR5 249 aa10□□□□□ -0.81
VPS52-217ENST00000478934 RIPOR3Q96MK2 946 aa10□□□□□ -0.81
VPS52-217ENST00000478934 HS6ST2Q96MM7 605 aa10□□□□□ -0.81
VPS52-217ENST00000478934 SNX18Q96RF0 628 aa10□□□□□ -0.81
VPS52-217ENST00000478934 TNFRSF13CQ96RJ3 184 aa10□□□□□ -0.81
VPS52-217ENST00000478934 CD180Q99467 661 aa10□□□□□ -0.81
VPS52-217ENST00000478934 ZFYVE21Q9BQ24 234 aa10□□□□□ -0.81
VPS52-217ENST00000478934 SLX1AQ9BQ83 275 aa10□□□□□ -0.81
VPS52-217ENST00000478934 HDHD2Q9H0R4 259 aa10□□□□□ -0.81
VPS52-217ENST00000478934 KLHL1Q9NR64 748 aa10□□□□□ -0.81
VPS52-217ENST00000478934 MCUBQ9NWR8 336 aa10□□□□□ -0.81
VPS52-217ENST00000478934 EXTL2Q9UBQ6 330 aa10□□□□□ -0.81
VPS52-217ENST00000478934 SDK1Q7Z5N4 2213 aa10□□□□□ -0.81
VPS52-217ENST00000478934 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
VPS52-217ENST00000478934 ARID1BQ8NFD5 2236 aaPredicted RBP10□□□□□ -0.81
VPS52-217ENST00000478934 PPP1R3DO95685 299 aa10□□□□□ -0.81
VPS52-217ENST00000478934 NID1P14543 1247 aa10□□□□□ -0.81
VPS52-217ENST00000478934 NDUFS1P28331 727 aa10□□□□□ -0.81
VPS52-217ENST00000478934 EVI2BP34910 448 aa10□□□□□ -0.81
VPS52-217ENST00000478934 KIAA1024LP59773 190 aa10□□□□□ -0.81
VPS52-217ENST00000478934 PPP3R1P63098 170 aa10□□□□□ -0.81
VPS52-217ENST00000478934 MAT1AQ00266 395 aaKnown RBP10□□□□□ -0.81
VPS52-217ENST00000478934 FOXK2Q01167 660 aa10□□□□□ -0.81
VPS52-217ENST00000478934 RANBP3LQ86VV4 465 aaPredicted RBP10□□□□□ -0.81
VPS52-217ENST00000478934 OR52R1Q8NGF1 315 aa10□□□□□ -0.81
VPS52-217ENST00000478934 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
VPS52-217ENST00000478934 RSC1A1Q92681 617 aa10□□□□□ -0.81
VPS52-217ENST00000478934 PEX11GQ96HA9 241 aa10□□□□□ -0.81
VPS52-217ENST00000478934 MED18Q9BUE0 208 aa10□□□□□ -0.81
VPS52-217ENST00000478934 ANKRD19PQ9H560 264 aa10□□□□□ -0.81
VPS52-217ENST00000478934 WSB2Q9NYS7 404 aaPredicted RBP10□□□□□ -0.81
VPS52-217ENST00000478934 TMA7Q9Y2S6 64 aaKnown RBP10□□□□□ -0.81
VPS52-217ENST00000478934 MPDZO75970 2070 aa10□□□□□ -0.81
VPS52-217ENST00000478934 CACNA1CQ13936 2221 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 TGFBR3LH3BV60 316 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 TNFSF14O43557 240 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 RNF13O43567 381 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 AKAP8O43823 692 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 GPR75O95800 540 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 HLA-DPB1P04440 258 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 EIF4EP06730 217 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 ALAS2P22557 587 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ARFIP1P53367 373 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 OR12D2P58182 307 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CRMP1Q14194 572 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ESPNLQ6ZVH7 1005 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 MEPCEQ7L2J0 689 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 CA13Q8N1Q1 262 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 METTL27Q8N6F8 245 aaPredicted RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 LRRC17Q8N6Y2 441 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 DNAJC5GQ8N7S2 189 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 SLC37A2Q8TED4 501 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 DNAJA4Q8WW22 397 aaPredicted RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 HMGB4Q8WW32 186 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms