RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 DCCP43146 1447 aa3.53□□□□□ -1.85
PTCD3-211ENST00000476215 SETD5Q9C0A6 1442 aa3.53□□□□□ -1.85
PTCD3-211ENST00000476215 ABCC11Q96J66 1382 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 DIP2AQ14689 1571 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 SETBP1Q9Y6X0 1596 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 A0A1B0GUL7 405 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 RGSL1A5PLK6 1076 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 OR6C65A6NJZ3 312 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 MBD3O95983 291 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 AK1P00568 194 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 HSPB1P04792 205 aaKnown RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 HBQ1P09105 142 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 DUX4L4P0CJ87 422 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 CALCBP10092 127 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 PSMB1P20618 241 aaKnown RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ADORA2BP29275 332 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 DLSTP36957 453 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 CD86P42081 329 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 DIO3P55073 304 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 STX17P56962 302 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 NUCB2P80303 420 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ST3GAL3Q11203 375 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ATXN7L3Q14CW9 347 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 MAPK6Q16659 721 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 METTL11BQ5VVY1 283 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 WSCD1Q658N2 575 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ZNF544Q6NX49 715 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 TFAP2EQ6VUC0 442 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ANKRD37Q7Z713 158 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 CEND1Q8N111 149 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ZNF564Q8TBZ8 553 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 AKR1E2Q96JD6 320 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 SLC30A2Q9BRI3 323 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 MRPL13Q9BYD1 178 aaKnown RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 NMUR2Q9GZQ4 415 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 RHOJQ9H4E5 214 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 SPRR3Q9UBC9 169 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 LRRK1Q38SD2 2015 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-211ENST00000476215 C1orf167Q5SNV9 1468 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 SPATA31E1Q6ZUB1 1445 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 ADGRL3Q9HAR2 1447 aa3.52□□□□□ -1.85
PTCD3-211ENST00000476215 LRPPRCP42704 1394 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 ATRXP46100 2492 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 NEXMIFQ5QGS0 1516 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 PHLPP1O60346 1717 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 STX7O15400 261 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CLDN3O15551 220 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 GPX5O75715 221 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CABYRO75952 493 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 DIRAS3O95661 229 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CSF2P04141 144 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 BDKRB1P46663 353 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 RPL29P47914 159 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 SLC26A2P50443 739 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CELF3Q5SZQ8 465 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 ASPHD2Q6ICH7 369 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 AFTPHQ6ULP2 937 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CBLN3Q6UW01 205 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 TRPM8Q7Z2W7 1104 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 C14orf178Q8N769 122 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 DPH5Q9H2P9 285 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 WDR76Q9H967 626 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CAB39LQ9H9S4 337 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 POLE3Q9NRF9 147 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 PLSCR3Q9NRY6 295 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 PAK1IP1Q9NWT1 392 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 XPO7Q9UIA9 1087 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 ANAPC7Q9UJX3 599 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 SPACA6W5XKT8 324 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CCDC144AA2RUR9 1427 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 LRP6O75581 1613 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 CLTCL1P53675 1640 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 AHDC1Q5TGY3 1603 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 NRXN3Q9Y4C0 1643 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 DHX57Q6P158 1386 aaKnown RBP3.51□□□□□ -1.85
PTCD3-211ENST00000476215 PNPLA6Q8IY17 1366 aa3.51□□□□□ -1.85
PTCD3-211ENST00000476215 BICDL2A1A5D9 508 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 C19orf81C9J6K1 198 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 K7ENP7 123 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 EFNA2O43921 213 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 CHRNA1P02708 482 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 STSP08842 583 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 PDHBP11177 359 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 NCF1P14598 390 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-211ENST00000476215 CD1EP15812 388 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 VDAC1P21796 283 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 MRPS11P82912 194 aaKnown RBP3.5□□□□□ -1.85
PTCD3-211ENST00000476215 KYAT1Q16773 422 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 HSP90AA5PQ58FG0 334 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 TMEM41BQ5BJD5 291 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 OR2B11Q5JQS5 317 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 CXCL17Q6UXB2 119 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 FRA10AC1Q70Z53 315 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 DPY19L4Q7Z388 723 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 TMEM17Q86X19 198 aa3.5□□□□□ -1.85
PTCD3-211ENST00000476215 CENPLQ8N0S6 344 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-211ENST00000476215 OR10H4Q8NGA5 316 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms