RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 OR5W2Q8NH69 310 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 C7orf26Q96N11 449 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 LAT2Q9GZY6 243 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 SAP130Q9H0E3 1048 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 SLCO1B3Q9NPD5 702 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 SLC6A13Q9NSD5 602 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 ZIM2Q9NZV7 527 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
UPF3A-203ENST00000474056 BCAS1O75363 584 aaPredicted RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SYNGR4O95473 234 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 NTN1O95631 604 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 CSTAP01040 98 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 IL6P05231 212 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 GUSBP08236 651 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 UBTFL6P0CB48 400 aaPredicted RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 CHRNEQ04844 493 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 FGFBP1Q14512 234 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 QPRTQ15274 297 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SYPL1Q16563 259 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 GPAT3Q53EU6 434 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 COX20Q5RI15 118 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 EPGNQ6UW88 154 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 DNAJC14Q6Y2X3 702 aaPredicted RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 FAM214BQ7L5A3 538 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 ZNF619Q8N2I2 560 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 PNPT1Q8TCS8 783 aaKnown RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 LRRC8CQ8TDW0 803 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 OSTF1Q92882 214 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 ZG16BQ96DA0 208 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 MRGPRX4Q96LA9 322 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SRXN1Q9BYN0 137 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 QRSL1Q9H0R6 528 aaKnown RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 LIME1Q9H400 295 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 COQ10BQ9H8M1 238 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 POLE3Q9NRF9 147 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SDR39U1Q9NRG7 319 aaPredicted RBP16.06■□□□□ 0.16
UPF3A-203ENST00000474056 PROCRQ9UNN8 238 aa16.06■□□□□ 0.16
UPF3A-203ENST00000474056 SH3D21A4FU49 640 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ETV2O00321 342 aaPredicted RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 RFXANKO14593 260 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 DNAJA2O60884 412 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 H6PDO95479 791 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 CD8BP10966 210 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 NID1P14543 1247 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 DNAJA1P31689 397 aaKnown RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 CCKARP32238 428 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 PGM1P36871 562 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 CD79BP40259 229 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 HPCAP84074 193 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 PLAURQ03405 335 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 LRRC74AQ0VAA2 488 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 SELENBP1Q13228 472 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ZNF239Q16600 458 aaKnown RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 TMEM176BQ3YBM2 270 aaPredicted RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 AP1ARQ63HQ0 302 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 EIF3MQ7L2H7 374 aaKnown RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 CDC20BQ86Y33 519 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ANKFN1Q8N957 763 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ZNF610Q8N9Z0 462 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 FAM71CQ8NEG0 241 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ATP6V1C2Q8NEY4 427 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ZFP90Q8TF47 636 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 ROBO4Q8WZ75 1007 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 GMPPAQ96IJ6 420 aaPredicted RBP16.05■□□□□ 0.16
UPF3A-203ENST00000474056 DACH2Q96NX9 599 aa16.05■□□□□ 0.16
UPF3A-203ENST00000474056 CLDN24A6NM45 220 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 SS18L1O75177 396 aaPredicted RBP16.04■□□□□ 0.16
UPF3A-203ENST00000474056 PLGP00747 810 aaPredicted RBP16.04■□□□□ 0.16
UPF3A-203ENST00000474056 CHRM4P08173 479 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 POU2F1P14859 743 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 H2AFXP16104 143 aaPredicted RBP16.04■□□□□ 0.16
UPF3A-203ENST00000474056 CARD18P57730 90 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 TESK1Q15569 626 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 GTDC1Q4AE62 458 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 TIGD2Q4W5G0 525 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 HDXQ7Z353 690 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 OR6K3Q8NGY3 331 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 OIT3Q8WWZ8 545 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 EBF4Q9BQW3 602 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 SLC38A1Q9H2H9 487 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 SLC35A3Q9Y2D2 325 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 EMC9Q9Y3B6 208 aa16.04■□□□□ 0.16
UPF3A-203ENST00000474056 PRRC2AP48634 2157 aaKnown RBP16.03■□□□□ 0.16
UPF3A-203ENST00000474056 A0A1W2PNR3 127 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 PGCP20142 388 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 KCNJ5P48544 419 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 POLR2JP52435 117 aaKnown RBP16.03■□□□□ 0.16
UPF3A-203ENST00000474056 MVDP53602 400 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 CTBP2P56545 445 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 SESN3P58005 492 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 KCNJ10P78508 379 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 TXNL4AP83876 142 aaKnown RBP16.03■□□□□ 0.16
UPF3A-203ENST00000474056 POU4F3Q15319 338 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 FBXW10Q5XX13 1052 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 C3orf33Q6P1S2 294 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 LRRC74BQ6ZQY2 392 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 MIER2Q8N344 545 aa16.03■□□□□ 0.16
UPF3A-203ENST00000474056 CPNE4Q96A23 557 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms