RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 FBXW9Q5XUX1 488 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 RFWD2Q8NHY2 731 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 JADE3Q92613 823 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZMYND19Q96E35 227 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 OTUB1Q96FW1 271 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 OR5B2Q96R09 309 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 VRK1Q99986 396 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 C1QTNF3Q9BXJ4 246 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 CARD8Q9Y2G2 431 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 POLR3HQ9Y535 204 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 ARFGEF3Q5TH69 2177 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 A0A1W2PQD3 144 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF724A8MTY0 619 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 CYTIPO60759 359 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ALOX5P09917 674 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ACP2P11117 423 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF23P17027 643 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 LRIG3Q6UXM1 1119 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 SLC16A11Q8NCK7 471 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF540Q8NDQ6 660 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 SGMS2Q8NHU3 365 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 SORCS2Q96PQ0 1159 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 EMC3Q9P0I2 261 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 METRNQ9UJH8 293 aa16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
NCKIPSD-209ENST00000470006 LRP5LA4QPB2 252 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 H3BNH8 94 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 SMAD9O15198 467 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 PDPK1O15530 556 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 INHBAP08476 426 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 EGR1P18146 543 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 TAC1P20366 129 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 LCN1P31025 176 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 PHBP35232 272 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 P2RX1P51575 399 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 GNG11P61952 73 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 SNRPD2P62316 118 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 PHC1P78364 1004 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 SELENBP1Q13228 472 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 TOMM34Q15785 309 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 DUSP5Q16690 384 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 UNC50Q53HI1 259 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 CBLN3Q6UW01 205 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 SLC46A3Q7Z3Q1 461 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 TMCO5AQ8N6Q1 288 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 APH1AQ96BI3 265 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 KCNA7Q96RP8 456 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 NAPGQ99747 312 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 SOX7Q9BT81 388 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 BHLHE41Q9C0J9 482 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 ASB6Q9NWX5 421 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 GIN1Q9NXP7 522 aa16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 NOSIPQ9Y314 301 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-209ENST00000470006 NPIPA5A0A0B4J1W7 369 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 NPIPA7E9PJI5 369 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 OIP5O43482 229 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 NPIPA8P0DM63 369 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 PRKCAP17252 672 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ATP6V1C1P21283 382 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 MAP3K8P41279 467 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 CCR4P51679 360 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 POU6F2P78424 691 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 GUCY2DQ02846 1103 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZNF678Q5SXM1 525 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 OR7E24Q6IFN5 339 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ANKRD26P1Q6NSI1 321 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZNF527Q8NB42 609 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 TOR1AIP2Q8NFQ8 470 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZFP28Q8NHY6 868 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZNF75CPQ92670 426 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 CIDECQ96AQ7 238 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 C16orf58Q96GQ5 468 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 MRGPRX4Q96LA9 322 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 MS4A4EQ96PG1 132 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 BPESC1Q9GZL8 116 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 MYOZ1Q9NP98 299 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 SIRT5Q9NXA8 310 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 TAS2R16Q9NYV7 291 aa16.63■□□□□ 0.25
NCKIPSD-209ENST00000470006 ENO1P06733 434 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 IFI6P09912 130 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 NDUFAF6Q330K2 333 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 C9orf135Q5VTT2 229 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 RINLQ6ZS11 566 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZNF614Q8N883 585 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 GPR119Q8TDV5 335 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 HOXB13Q92826 284 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 STK38LQ9Y2H1 464 aa16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 WBP11Q9Y2W2 641 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-209ENST00000470006 TGP01266 2768 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 ATP6V1G2-DDX39BF2Z307 99 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 VENTXO95231 258 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 HSPA4LO95757 839 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 SBK3P0C264 359 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms