RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 FOXE3Q13461 319 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CPSF6Q16630 551 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 LY6KQ17RY6 165 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 MARC1Q5VT66 337 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 TMEM236Q5W0B7 351 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CYB5R2Q6BCY4 276 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 DHRS7BQ6IAN0 325 aaPredicted RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 DPY19L3Q6ZPD9 716 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 OR2L5Q8NG80 312 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 SORCS1Q8WY21 1168 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 NXNL1Q96CM4 212 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 SPHK1Q9NYA1 384 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 TMEM181Q9P2C4 612 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 STOML2Q9UJZ1 356 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 TSSC4Q9Y5U2 329 aaPredicted RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 TMEM82A0PJX8 343 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 PRORSD1PA6NEY8 169 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 KCNU1A8MYU2 1149 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 SLC28A1O00337 649 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 LRP3O75074 770 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 RPN2P04844 631 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 ARSAP15289 507 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CFHR2P36980 270 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 TNFSF9P41273 254 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 RGRP47804 291 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CLCN3P51790 818 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 GK2Q14410 553 aaPredicted RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 EMC2Q15006 297 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 SMN1Q16637 294 aaKnown RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 GUK1Q16774 197 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 H3F3CQ6NXT2 135 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 BHLHB9Q6PI77 547 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 ZNF546Q86UE3 836 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 C4orf19Q8IY42 314 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 ADPRHL1Q8NDY3 354 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 OR52H1Q8NGJ2 320 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CANT1Q8WVQ1 401 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 HARBI1Q96MB7 349 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 COPS4Q9BT78 406 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 RBM24Q9BX46 236 aaKnown RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 PPA2Q9H2U2 334 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 PTTG3PQ9NZH4 202 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 OPTCQ9UBM4 332 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 KPTNQ9Y664 436 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 SBF2Q86WG5 1849 aa7.1□□□□□ -1.27
SPTBN1-204ENST00000467371 hCG_1818297A0A087WSY0 165 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 A0A1W2PPQ1 181 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 FAM90A10PA6NDY2 464 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 FAM159BA6NKW6 160 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 PTGESO14684 152 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NBR2O15453 112 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 OR6A2O95222 327 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NBEAP1P0C6P0 100 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 EEFSECP57772 596 aaKnown RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 PITPNAQ00169 270 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NAAAQ02083 359 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 ACOX1Q15067 660 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 PHF19Q5T6S3 580 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SAMD5Q5TGI4 173 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SSX9Q7RTT3 188 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 MRPL21Q7Z2W9 205 aaKnown RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 GPAT4Q86UL3 456 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 AMIGO1Q86WK6 493 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 C10orf107Q8IVU9 208 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 VANGL1Q8TAA9 524 aaPredicted RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 FAM110BQ8TC76 370 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SLC7A6Q92536 515 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 BIRC7Q96CA5 298 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SPATA33Q96N06 139 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 ST6GALNAC5Q9BVH7 336 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 FSD1LQ9BXM9 530 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 FTHL17Q9BXU8 183 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 PPP1R3EQ9H7J1 279 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 CAB39LQ9H9S4 337 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 Q9N2J8 555 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NDUFAF1Q9Y375 327 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NUBP2Q9Y5Y2 271 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 NHSQ6T4R5 1651 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 ADM5C9JUS6 153 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 H3BN98 237 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 GRPP07492 148 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 HOXC6P09630 235 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 CD8BP10966 210 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 ACADLP28330 430 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 C21orf33P30042 268 aaPredicted RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 RPS9P46781 194 aaKnown RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 KCNJ11Q14654 390 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 IRF4Q15306 451 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 MROH9Q5TGP6 573 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 ZNF562Q6V9R5 426 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SEM1Q6ZVN7 128 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 HS3ST5Q8IZT8 346 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 OR5B17Q8NGF7 314 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 OR4D10Q8NGI6 311 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 SCAMP4Q969E2 229 aa7.09□□□□□ -1.27
SPTBN1-204ENST00000467371 PPWD1Q96BP3 646 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms