RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CLEC4AQ9UMR7 237 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 AURKCQ9UQB9 309 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 R3HDM2Q9Y2K5 976 aaKnown RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 C15orf41Q9Y2V0 281 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CLDN16Q9Y5I7 305 aa4.87□□□□□ -1.63
PTCD3-207ENST00000467273 CHCHD2Q9Y6H1 151 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-207ENST00000467273 ROS1P08922 2347 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 DYSFO75923 2080 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 A0A096LNT2 108 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 A0A1W2PNV4 684 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 HMX3A6NHT5 357 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 UNC119BA6NIH7 251 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SLCO1B7G3V0H7 640 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 UBFD1O14562 309 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TP53I11O14683 189 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 PGRMC2O15173 223 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 DHHO43323 396 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TCF21O43680 179 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 OR1F1O43749 312 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 OR10H2O60403 315 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 LMX1BO60663 402 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CTNSO60931 367 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TRAPPC6AO75865 159 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SYF2O95926 243 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SERPINC1P01008 464 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 IFNA16P05015 189 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 FESP07332 822 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SERPINA6P08185 405 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 PCNAP12004 261 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 POU2F1P14859 743 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SLC25A16P16260 332 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 GSTM2P28161 218 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CCKARP32238 428 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TMED10P49755 219 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 RAB38P57729 211 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 GMFBP60983 142 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 STXBP1P61764 594 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 RPP38P78345 283 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 KCNJ10P78508 379 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CCZ1BP86790 482 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CCZ1P86791 482 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.635e-7■■■■□ 26.5
PTCD3-207ENST00000467273 STX1AQ16623 288 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SMU1Q2TAY7 513 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 ACSBG2Q5FVE4 666 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CTSL3PQ5NE16 218 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 KLC3Q6P597 504 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SASS6Q6UVJ0 657 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 RHOUQ7L0Q8 258 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 ADCK1Q86TW2 530 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TAGAPQ8N103 731 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 CA13Q8N1Q1 262 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 TRIM58Q8NG06 486 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 SLC2A12Q8TD20 617 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 ABHD5Q8WTS1 349 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 ANKRD7Q92527 254 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 LPGAT1Q92604 370 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 KCNJ9Q92806 393 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 INTS12Q96CB8 462 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 STARD4Q96DR4 205 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 C11orf24Q96F05 449 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 FAR2Q96K12 515 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 HS6ST2Q96MM7 605 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF778Q96MU6 729 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 KRT12Q99456 494 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 THUMPD3Q9BV44 507 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 OR8D2Q9GZM6 311 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 NAT10Q9H0A0 1025 aaKnown RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 MARCH4Q9P2E8 410 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-207ENST00000467273 DNAJB9Q9UBS3 223 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 DKK2Q9UBU2 259 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 LAMP3Q9UQV4 416 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 DLGAP4Q9Y2H0 992 aa4.86□□□□□ -1.63
PTCD3-207ENST00000467273 FREM3P0C091 2139 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 MED12LQ86YW9 2145 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 RNF103-CHMP3A0A140T963 221 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 OR6C76A6NM76 312 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 BTNL10A8MVZ5 291 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 C17orf105B2RV13 164 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 H0YIV9 168 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 EMC8O43402 210 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 HCRTR2O43614 444 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 SLC25A17O43808 307 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF354AO60765 605 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-207ENST00000467273 NIPSNAP2O75323 286 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 TJP3O95049 919 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 SPDEFO95238 335 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 METTL18O95568 372 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 ACSL3O95573 720 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 IGHV4-39P01824 125 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 SERPIND1P05546 499 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 S100A9P06702 114 aaKnown RBP4.85□□□□□ -1.63
PTCD3-207ENST00000467273 DANCRP0C864 163 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 CDH1P12830 882 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 COX7A2P14406 83 aa4.85□□□□□ -1.63
PTCD3-207ENST00000467273 OGNP20774 298 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms