RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CTBP2P56545 445 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 LRRC74AQ0VAA2 488 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 QPRTQ15274 297 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 POU4F3Q15319 338 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 PDCD4Q53EL6 469 aaKnown RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 TYW3Q6IPR3 259 aaKnown RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 C3orf33Q6P1S2 294 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF474Q6S9Z5 364 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 PAMR1Q6UXH9 720 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 FRRS1Q6ZNA5 592 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 RNF130Q86XS8 419 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF619Q8N2I2 560 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 GLB1L3Q8NCI6 653 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 OR5W2Q8NH69 310 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 PIWIL2Q8TC59 973 aaKnown RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 GPR119Q8TDV5 335 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 RNF128Q8TEB7 428 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ZFP90Q8TF47 636 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 XAGE5Q8WWM1 108 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 OIT3Q8WWZ8 545 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 CPNE4Q96A23 557 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ARSGQ96EG1 525 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 OR52E6Q96RD3 313 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 COQ10BQ9H8M1 238 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 POLE3Q9NRF9 147 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 NDRG3Q9UGV2 375 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 HIVEP1P15822 2718 aa9.11□□□□□ -0.95
SF3A3-204ENST00000462258 ABCA4P78363 2273 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 CCDC154A6NI56 674 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ETV2O00321 342 aaPredicted RBP9.1□□□□□ -0.95
SF3A3-204ENST00000462258 HMGN4O00479 90 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF195O14628 629 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 CSTAP01040 98 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 C1QCP02747 245 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 HRGP04196 525 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 GUSBP08236 651 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 AGTR1P30556 359 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SLC7A1P30825 629 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 UGT2B10P36537 528 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 IST1P53990 364 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 MAPK14Q16539 360 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 EXOC3L2Q2M3D2 409 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 GPAT3Q53EU6 434 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SPNS3Q6ZMD2 512 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 EIF3MQ7L2H7 374 aaKnown RBP9.1□□□□□ -0.95
SF3A3-204ENST00000462258 FAM71CQ8NEG0 241 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ATP6V1C2Q8NEY4 427 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 PNPT1Q8TCS8 783 aaKnown RBP9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ST8SIA1Q92185 356 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ARL8AQ96BM9 186 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 OR52B2Q96RD2 323 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SLC39A3Q9BRY0 314 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 INPP5KQ9BT40 448 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 MED18Q9BUE0 208 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 THUMPD3Q9BV44 507 aaKnown RBP9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SRXN1Q9BYN0 137 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 LAT2Q9GZY6 243 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 LIME1Q9H400 295 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 TIGARQ9NQ88 270 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 GLRX2Q9NS18 164 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 KLHL28Q9NXS3 571 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ELOVL5Q9NYP7 299 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 ZIM2Q9NZV7 527 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 SLC35A3Q9Y2D2 325 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 PLEKHA6Q9Y2H5 1048 aa9.1□□□□□ -0.95
SF3A3-204ENST00000462258 PRRC2AP48634 2157 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 PRAMEF27A3QJZ7 478 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 RFXANKO14593 260 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 CASKO14936 926 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 EFNA2O43921 213 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 DIAPH2O60879 1101 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 DNAJA2O60884 412 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 BCAS1O75363 584 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 SLC22A3O75751 556 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 H6PDO95479 791 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 IL6P05231 212 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 GSNP06396 782 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 PABPC4LP0CB38 370 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 NID1P14543 1247 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 CD1EP15812 388 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 PGCP20142 388 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 DNASE1P24855 282 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 PGM1P36871 562 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ANXA11P50995 505 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 CARD18P57730 90 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 TXNL4AP83876 142 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 GSTA3Q16772 222 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 TMEM176BQ3YBM2 270 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 TIGD2Q4W5G0 525 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 TTMPQ5BVD1 217 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF621Q6ZSS3 439 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF550Q7Z398 422 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 HMGN2P46Q86SG4 172 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ANKFN1Q8N957 763 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF610Q8N9Z0 462 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 OR9I1Q8NGQ6 314 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 LRRC8CQ8TDW0 803 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms