RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 NEUROD4Q9HD90 331 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 C20orf141Q9NUB4 165 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 PRKAG2Q9UGJ0 569 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 SLC7A7Q9UM01 511 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 MOKQ9UQ07 419 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 MEIS3P1A6NDR6 274 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 GALR3O60755 368 aaPredicted RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 MAPK8P45983 427 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 METAP1P53582 386 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 FXYD6P3P58550 94 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 GNA13Q14344 377 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 GPNMBQ14956 572 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 BEX5Q5H9J7 111 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 PRAMEF14Q5SWL7 426 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 ZNF660Q6AZW8 331 aaPredicted RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 GDF7Q7Z4P5 450 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 ADCK2Q7Z695 626 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 PDZD9Q8IXQ8 264 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 OR9A1PQ8NGU1 263 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 C2CD4CQ8TF44 421 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 CYB5D2Q8WUJ1 264 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 KISS1RQ969F8 398 aaPredicted RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 RGMAQ96B86 450 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 MCHR1Q99705 422 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 NDC1Q9BTX1 674 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 C6orf106Q9H6K1 298 aaPredicted RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 IL20Q9NYY1 176 aa10.87□□□□□ -0.67
CPSF3-202ENST00000460593 ARID1BQ8NFD5 2236 aaPredicted RBP10.87□□□□□ -0.67
CPSF3-202ENST00000460593 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 D6RAR5 112 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ZIC2O95409 532 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 VSIG10L2P0DP72 767 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 CKBP12277 381 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 PRG2P13727 222 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 PNLIPRP1P54315 467 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 RGS8P57771 180 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GPR85P60893 370 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ZNF85Q03923 595 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 FAM83HQ6ZRV2 1179 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 FCRLAQ7L513 359 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 DNAJB7Q7Z6W7 309 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 LRRC56Q8IYG6 542 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GLYATL1Q969I3 302 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 AMDHD1Q96NU7 426 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 SGPP1Q9BX95 441 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GPR174Q9BXC1 333 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 OR52D1Q9H346 318 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 FANCFQ9NPI8 374 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 POT1Q9NUX5 634 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ZMAT5Q9UDW3 170 aaKnown RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 YIPF1Q9Y548 306 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 IDSB3KWA1 339 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 PYCARD-AS1I3L0S3 204 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GPR31O00270 319 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GOSR2O14653 212 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 LEFTY1O75610 366 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ATG12O94817 140 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 LDOC1O95751 146 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 EOMESO95936 686 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 MT-ND5P03915 603 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GALTP07902 379 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 TMIGD3P0DMS9 266 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 NDUFV2P19404 249 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 CTGFP29279 349 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GK2Q14410 553 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 METTL11BQ5VVY1 283 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 GLDNQ6ZMI3 551 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 MEPCEQ7L2J0 689 aaKnown RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 BPIFCQ8NFQ6 507 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 OR8K3Q8NH51 312 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 MNTQ99583 582 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 NKX3-1Q99801 234 aaPredicted RBP10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ENTPD4Q9Y227 616 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 ASF1AQ9Y294 204 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 CDH23Q9H251 3354 aa10.86□□□□□ -0.67
CPSF3-202ENST00000460593 OR2M5A3KFT3 312 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 FLRT2O43155 660 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 TGM6O95932 706 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
CPSF3-202ENST00000460593 RLN1P04808 185 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 GKN3PP0CG01 181 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
CPSF3-202ENST00000460593 SORDQ00796 357 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 MC2RQ01718 297 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 PLA2G7Q13093 441 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 LTB4RQ15722 352 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 PDSS1Q5T2R2 415 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 GDPD4Q6W3E5 623 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 CBLN2Q8IUK8 224 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 OR51A7Q8NH64 312 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 THEM6Q8WUY1 208 aa10.85□□□□□ -0.67
CPSF3-202ENST00000460593 AHCYL2Q96HN2 611 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms