RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SLC25A53Q5H9E4 307 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 PAMR1Q6UXH9 720 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 TOR1AIP2Q8NFQ8 470 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 OR6K3Q8NGY3 331 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 RFWD2Q8NHY2 731 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 XAGE5Q8WWM1 108 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 OSTF1Q92882 214 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 MANSC1Q9H8J5 431 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 POLE3Q9NRF9 147 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 ETV2O00321 342 aaPredicted RBP16.92■□□□□ 0.3
COL5A1-203ENST00000460264 DNAJA2O60884 412 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 CSTAP01040 98 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 C1QCP02747 245 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 PGRP06401 933 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 KCNJ5P48544 419 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 CARD18P57730 90 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 CBFBQ13951 182 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 QPRTQ15274 297 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 MAPK14Q16539 360 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 TYW3Q6IPR3 259 aaKnown RBP16.92■□□□□ 0.3
COL5A1-203ENST00000460264 FRRS1Q6ZNA5 592 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 MAVSQ7Z434 540 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 OIT3Q8WWZ8 545 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 ROPN1LQ96C74 230 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 MAELQ96JY0 434 aaKnown RBP16.92■□□□□ 0.3
COL5A1-203ENST00000460264 WFIKKN1Q96NZ8 548 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 OR52E6Q96RD3 313 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 PANX1Q96RD7 426 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 ZBTB18Q99592 522 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 FOXC2Q99958 501 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 INPP5KQ9BT40 448 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 SRXN1Q9BYN0 137 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 LAT2Q9GZY6 243 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 CXXC4Q9H2H0 198 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 PLEKHF2Q9H8W4 249 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 GLRX2Q9NS18 164 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 KLHL28Q9NXS3 571 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 EDARQ9UNE0 448 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 WDR45Q9Y484 360 aa16.92■□□□□ 0.3
COL5A1-203ENST00000460264 A0A1W2PPR1 153 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 GJE1A6NN92 205 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 C16orf97H3BN30 126 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 KLF11O14901 512 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 CASKO14936 926 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 CYP7B1O75881 506 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 IDO1P14902 403 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 DNASE1P24855 282 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 CDKN2CP42773 168 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 SELENBP1Q13228 472 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 TMEM176BQ3YBM2 270 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-203ENST00000460264 SLC9B1Q4ZJI4 515 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 NXNQ6DKJ4 435 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 EIF3MQ7L2H7 374 aaKnown RBP16.91■□□□□ 0.3
COL5A1-203ENST00000460264 RNF130Q86XS8 419 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 TRIML2Q8N7C3 387 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 FAM71CQ8NEG0 241 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 RNF128Q8TEB7 428 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 ZFP90Q8TF47 636 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 ROBO4Q8WZ75 1007 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 CPNE4Q96A23 557 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-203ENST00000460264 MARK4Q96L34 752 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 MED18Q9BUE0 208 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 THUMPD3Q9BV44 507 aaKnown RBP16.91■□□□□ 0.3
COL5A1-203ENST00000460264 SAP130Q9H0E3 1048 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 COQ10BQ9H8M1 238 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 PLSCR4Q9NRQ2 329 aa16.91■□□□□ 0.3
COL5A1-203ENST00000460264 UQCRHLA0A096LP55 91 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 PRAMEF27A3QJZ7 478 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 HMGN4O00479 90 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 RAF1P04049 648 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 UBTFL6P0CB48 400 aaPredicted RBP16.9■□□□□ 0.3
COL5A1-203ENST00000460264 AGTR1P30556 359 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 LRRC74AQ0VAA2 488 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 EXOC3L2Q2M3D2 409 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 PDCD4Q53EL6 469 aaKnown RBP16.9■□□□□ 0.3
COL5A1-203ENST00000460264 AGBL2Q5U5Z8 902 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF550Q7Z398 422 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF619Q8N2I2 560 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 GLB1L3Q8NCI6 653 aaPredicted RBP16.9■□□□□ 0.3
COL5A1-203ENST00000460264 ATP6V1C2Q8NEY4 427 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 ABHD3Q8WU67 409 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 ST8SIA1Q92185 356 aa16.9■□□□□ 0.3
COL5A1-203ENST00000460264 DEFB108AA8MXU0 73 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 SIAH2O43255 324 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 PABPC4LP0CB38 370 aaKnown RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 PGM1P36871 562 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 HPCAP84074 193 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 TIGD2Q4W5G0 525 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 GPAT3Q53EU6 434 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 C3orf33Q6P1S2 294 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 PIWIL2Q8TC59 973 aaKnown RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 ZNF75CPQ92670 426 aaPredicted RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 ARL8AQ96BM9 186 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 ZG16BQ96DA0 208 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 MBD6Q96DN6 1003 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 REXO5Q96IC2 774 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms