RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TUSC5Q8IXB3 177 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 SLC16A11Q8NCK7 471 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 OR56A1Q8NGH5 318 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 LILRB1Q8NHL6 650 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 POC1BQ8TC44 478 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 PHOSPHO1Q8TCT1 267 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ZFP90Q8TF47 636 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CIDECQ96AQ7 238 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 MOAP1Q96BY2 351 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 GIMAP5Q96F15 307 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CHMP6Q96FZ7 201 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TRMOQ9BU70 441 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TRAF4Q9BUZ4 470 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TRIM2Q9C040 744 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 AMBRA1Q9C0C7 1298 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 PIGUQ9H490 435 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ZCCHC3Q9NUD5 404 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM160Q9NX00 188 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 EMC3Q9P0I2 261 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FAF1Q9UNN5 650 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 HEATR1Q9H583 2144 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 NUP214P35658 2090 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF724A8MTY0 619 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 G3V2L1 256 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 GOLGA8RI6L899 631 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 EIF4E2O60573 245 aaKnown RBP7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ADAM11O75078 769 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 IGHV4-39P01824 125 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 BMP2P12643 396 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 GGT1P19440 569 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ENPP1P22413 925 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 MAPK1P28482 360 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 NUDT6P53370 316 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CDH11P55287 796 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CSNK2A1P68400 391 aaPredicted RBP7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF117Q03924 483 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 TP53BP2Q13625 1128 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CBFBQ13951 182 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 KIAA0040Q15053 153 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CD226Q15762 336 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 STK11Q15831 433 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 PGGHGQ32M88 737 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 LSM12Q3MHD2 195 aaKnown RBP7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 KLHL26Q53HC5 615 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CDC73Q6P1J9 531 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 C3orf33Q6P1S2 294 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 BHLHB9Q6PI77 547 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM108Q6UXF1 575 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 NUFIP2Q7Z417 695 aaKnown RBP7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 IFT20Q8IY31 132 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF100Q8IYN0 542 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF619Q8N2I2 560 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CCDC63Q8NA47 563 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 MAPK1IP1LQ8NDC0 245 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 KBTBD8Q8NFY9 601 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 FBXO27Q8NI29 283 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 FBXO30Q8TB52 745 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ADAMTS15Q8TE58 950 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM234Q8WY98 164 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ZHX1-C8orf76Q96EF9 292 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 EGLN2Q96KS0 407 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 FCRL1Q96LA6 429 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ACTRT3Q9BYD9 372 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 SRXN1Q9BYN0 137 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 PPCSQ9HAB8 311 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 SERINC1Q9NRX5 453 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ATAD3AQ9NVI7 634 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 DCTN4Q9UJW0 460 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ICAM5Q9UMF0 924 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 CCL27Q9Y4X3 112 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 SPIN1Q9Y657 262 aaPredicted RBP7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
NIF3L1-209ENST00000454952 ALPK2Q86TB3 2170 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 MXRA5Q9NR99 2828 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 YLPM1P49750 1951 aaKnown RBP7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 GOLGA8QA0A0J9YX86 632 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 GOLGA8OA6NCC3 632 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 DPRXA6NFQ7 191 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 OR5H1A6NKK0 313 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 GOLGA8NF8WBI6 632 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 GPR171O14626 319 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 AZIN1O14977 448 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF264O43296 627 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 RIPK2O43353 540 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 AKAP10O43572 662 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 SSX4O60224 188 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 CYTIPO60759 359 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 PGM3O95394 542 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 AK1P00568 194 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 HMGN2P05204 90 aaKnown RBP7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 DHRS4L1P0CG22 281 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 CPA3P15088 417 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 SLC25A16P16260 332 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 PRKCAP17252 672 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 SDC1P18827 310 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 COX5AP20674 150 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 PTAFRP25105 342 aa7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 FKBP2P26885 142 aaKnown RBP7.1□□□□□ -1.27
NIF3L1-209ENST00000454952 GCAP28676 217 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms