RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LYPD3O95274 346 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 MRPL3P09001 348 aaKnown RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 LIMS3P0CW19 117 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 LIMS4P0CW20 117 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CLUP10909 449 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ZNF12P17014 697 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 PAICSP22234 425 aaKnown RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 CRYBB2P43320 205 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 MLLT11Q13015 90 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 MADCAM1Q13477 382 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 AADACL4Q5VUY2 407 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 KIRREL2Q6UWL6 708 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 MED25Q71SY5 747 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 G6PC3Q9BUM1 346 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 MARCH7Q9H992 704 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 ATXN7L1Q9ULK2 861 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 PI4KAP42356 2102 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TMEM265A0A087WTH1 108 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 A0A0B4J2E0 115 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 A0A1B0GX12 115 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CPED1A4D0V7 1026 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ZNF749O43361 778 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 DUX1O43812 170 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 PPP1R3DO95685 299 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 HMGN1P05114 100 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 GTF2E2P29084 291 aaKnown RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 CSF2RBP32927 897 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 SLC1A3P43003 542 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 PRKCDQ05655 676 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CRTC2Q53ET0 693 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 C3orf38Q5JPI3 329 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 MRGPREQ86SM8 312 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 PLXDC1Q8IUK5 500 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TMEM151BQ8IW70 566 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 LRRC17Q8N6Y2 441 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 NDC1Q9BTX1 674 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TNFRSF10DQ9UBN6 386 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 FBXL4Q9UKA2 621 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 STUB1Q9UNE7 303 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CAB39Q9Y376 341 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CHP2O43745 196 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 SULT1C4O75897 302 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CDRT1O95170 752 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 LALBAP00709 142 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TBXA2RP21731 343 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ATP12AP54707 1039 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ZNF613Q6PF04 617 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 RNF113BQ8IZP6 322 aaKnown RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 SIRT6Q8N6T7 355 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 PTPMT1Q8WUK0 201 aaPredicted RBP10.85□□□□□ -0.67
VTA1-203ENST00000452973 ZNF285Q96NJ3 590 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TMED9Q9BVK6 235 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 TTTY10Q9BZA0 68 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 SLC7A5P2Q9GIP4 190 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 PALMDQ9NP74 551 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 POLE3Q9NRF9 147 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 NDUFB11Q9NX14 153 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 CFL2Q9Y281 166 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 SIGLEC7Q9Y286 467 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 ZDBF2Q9HCK1 2354 aa10.85□□□□□ -0.67
VTA1-203ENST00000452973 H0YIG0 161 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 K7ESF4 209 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 RCBTB2O95199 551 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 CELP19835 753 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 COPZ1P61923 177 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 FOXK2Q01167 660 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 ZP2Q05996 745 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 FUT7Q11130 342 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 NSDHLQ15738 373 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 WDR45BQ5MNZ6 344 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 C19orf48Q6RUI8 117 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 ZNF615Q8N8J6 731 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 SYT14Q8NB59 555 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 PHOSPHO1Q8TCT1 267 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 CEP19Q96LK0 163 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 ADOQ96SZ5 270 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 NXF5Q9H1B4 397 aaKnown RBP10.84□□□□□ -0.67
VTA1-203ENST00000452973 C14orf105Q9NVL8 296 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 EPHA6Q9UF33 1036 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 BHLHE40O14503 412 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 NUDT21O43809 227 aaKnown RBP10.84□□□□□ -0.67
VTA1-203ENST00000452973 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.673e-9■□□□□ 9.7
VTA1-203ENST00000452973 CLEC2LP0C7M8 214 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 IGLV3-21P80748 117 aaPredicted RBP10.84□□□□□ -0.67
VTA1-203ENST00000452973 INSL4Q14641 139 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 NIPAL1Q6NVV3 410 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 POMZP3Q6PJE2 187 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 PRR23CQ6ZRP0 262 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 OR51L1Q8NGJ5 315 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 TRIM2Q9C040 744 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 PCED1AQ9H1Q7 454 aa10.84□□□□□ -0.67
VTA1-203ENST00000452973 LANCL2Q9NS86 450 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms