RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FOPNLQ96NB1 174 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 OR2A7Q96R45 310 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 GFM1Q96RP9 751 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 TIMP4Q99727 224 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 NPAS1Q99742 590 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 EGFL8Q99944 293 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 UQCC2Q9BRT2 126 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 UTP23Q9BRU9 249 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 THAP7Q9BT49 309 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 WACQ9BTA9 647 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 WRAP53Q9BUR4 548 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 CINPQ9BW66 212 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 EBPLQ9BY08 206 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ADGRE3Q9BY15 652 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF436Q9C0F3 470 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 DPAGT1Q9H3H5 408 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 OSGEPL1Q9H4B0 414 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 PLEKHA1Q9HB21 404 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF304Q9HCX3 659 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 BPIFA1Q9NP55 256 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 IL26Q9NPH9 171 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 IMP3Q9NV31 184 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 DNAJC11Q9NVH1 559 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 SLC39A1Q9NY26 324 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 COA4Q9NYJ1 87 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 COMMD3Q9UBI1 195 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 VPS29Q9UBQ0 182 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 LHX3Q9UBR4 397 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 AFF4Q9UHB7 1163 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 CPA4Q9UI42 421 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ICKQ9UPZ9 632 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ENTPD4Q9Y227 616 aa3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 NOSIPQ9Y314 301 aaKnown RBP3.84□□□□□ -1.79
HMGB3P22-202ENST00000451823 ANAPC1Q9H1A4 1944 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SRCAPQ6ZRS2 3230 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 PQLC2LA1A4F0 135 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ARL5CA6NH57 179 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 B5MCH6 92 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 NEDD8-MDP1E9PL57 170 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 FAM227AF5H4B4 570 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 M0R233 179 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF593O00488 134 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CASKO14936 926 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF749O43361 778 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SLC28A2O43868 658 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ACSL4O60488 711 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 GALR3O60755 368 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 PRAF2O60831 178 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 TSC22D2O75157 780 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SC5DO75845 299 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 OAZ2O95190 189 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ETHE1O95571 254 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 IGLV2-14P01704 120 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 RB1P06400 928 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 EIF4EP06730 217 aaKnown RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 LPLP06858 475 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 H1F0P07305 194 aaKnown RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 TYRP14679 529 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CPN1P15169 458 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 DPEP1P16444 411 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 MMP11P24347 488 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CTSSP25774 331 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 TIA1P31483 386 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CCR7P32248 378 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 FEN1P39748 380 aaKnown RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CD79BP40259 229 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 KCNJ5P48544 419 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF81P51508 661 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 MMP15P51511 669 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ACLYP53396 1101 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SMIM11AP58511 58 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 RAB14P61106 215 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ERVK-21P61565 698 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 RPS7P62081 194 aaKnown RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ARF5P84085 180 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 B4GALNT1Q00973 533 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CRYZQ08257 329 aaKnown RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CHIT1Q13231 466 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF169Q14929 603 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 STK11Q15831 433 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ETFDHQ16134 617 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SNAPC1Q16533 368 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF284Q2VY69 593 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ELFN2Q5R3F8 820 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 DCST1Q5T197 706 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 AADACL4Q5VUY2 407 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 FAM71E1Q6IPT2 247 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 GRHL2Q6ISB3 625 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 PYHIN1Q6K0P9 492 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ACSM5Q6NUN0 579 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 CASP12Q6UXS9 341 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 SLC36A4Q6YBV0 504 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 ZNF783Q6ZMS7 281 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 C3P1Q6ZMU1 363 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 LHFPL2Q6ZUX7 228 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 MOB2Q70IA6 237 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 IKBIPQ70UQ0 350 aa3.83□□□□□ -1.8
HMGB3P22-202ENST00000451823 MED25Q71SY5 747 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms