RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 A6NCN8 305 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 HCRTR2O43614 444 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 TM4SF4P48230 202 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ILKQ13418 452 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SMN1Q16637 294 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ASB13Q8WXK3 278 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 C8orf33Q9H7E9 229 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SYNPO2LQ9H987 977 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 OSGIN1Q9UJX0 560 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ADAM18Q9Y3Q7 739 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 A0A1W2PP55 124 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 OR7A17O14581 309 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 GIPP09681 153 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 GAAP10253 952 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 RNH1P13489 461 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 OR5L2Q8NGL0 311 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 MAN2C1Q9NTJ4 1040 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 UBE2J1Q9Y385 318 aaPredicted RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SNRNP70P08621 437 aaKnown RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ID2Q02363 134 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 LEG1Q6P5S2 330 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ALKAL2Q6UX46 152 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 MARC2Q969Z3 335 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 WDR77Q9BQA1 342 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 RPS26P62854 115 aaKnown RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 IL13RA1P78552 427 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 FOXK1P85037 733 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 SORDQ00796 357 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ATP13A2Q9NQ11 1180 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 HRGP04196 525 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ETV3P41162 512 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 VEGFCP49767 419 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 SLC35F3Q8IY50 421 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 OR8J2Q8NGG1 315 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 LURAP1Q96LR2 239 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 MYADMQ96S97 322 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 NKX6-2Q9C056 277 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ARAFP10398 606 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 MEF2AQ02078 507 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 C18orf21Q32NC0 220 aaPredicted RBP13.07□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF789Q5FWF6 425 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 SLC22A25Q6T423 547 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 RNF111Q6ZNA4 994 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 POC1BQ8TC44 478 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 SLC25A46Q96AG3 418 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 RNF215Q9Y6U7 377 aa13.07□□□□□ -0.32
ITGB4-202ENST00000449880 CSO75390 466 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ADRB1P08588 477 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ACPPP15309 386 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC35A2P78381 396 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PLCXD2Q0VAA5 305 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC43A2Q8N370 569 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC25A44Q96H78 314 aaPredicted RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 TGM7Q96PF1 710 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 A0A0A6YYH2 397 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 A6NJ64 397 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GLOD5A6NK44 160 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 KCNJ13O60928 360 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 PPP1R3DO95685 299 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 RAF1P04049 648 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 CSF2RAP15509 400 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GDNFP39905 211 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 ISL1P61371 349 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 TSPAN31Q12999 210 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
ITGB4-202ENST00000449880 TMEM200AQ86VY9 491 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 OR4M1Q8NGD0 313 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 GPR174Q9BXC1 333 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 DMRT3Q9NQL9 472 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 COL4A1P02462 1669 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 CIB4A0PJX0 185 aa13.06□□□□□ -0.32
ITGB4-202ENST00000449880 AGAP14A8MT82 685 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms