RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 POU6F2P78424 691 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 DGCR2P98153 550 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 DECR1Q16698 335 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 DEFB110Q30KQ9 67 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 AMZ1Q400G9 498 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ALG10BQ5I7T1 473 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 FAM78AQ5JUQ0 283 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ZNF836Q6ZNA1 936 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 LRRC56Q8IYG6 542 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 SAMD14Q8IZD0 417 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 RNF31Q96EP0 1072 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 BCL2L10Q9HD36 194 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 WASH6PQ9NQA3 447 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 FBXL4Q9UKA2 621 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SEC16AO15027 2179 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 A0A0A6YYD5 115 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ACOD1A6NK06 481 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 KLHL18O94889 574 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 GDI2P50395 445 aaKnown RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 CLDN20P56880 219 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 FOXK2Q01167 660 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 YIF1BQ5BJH7 314 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 OR5M3Q8NGP4 307 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 OR52N1Q8NH53 320 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SFXN5Q8TD22 340 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 KXD1Q9BQD3 176 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 RNF32Q9H0A6 362 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 MKKSQ9NPJ1 570 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 CBLCQ9ULV8 474 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ARID1AO14497 2285 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 H0YC42 278 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 LANCL1O43813 399 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 LILRB5O75023 590 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 HRGP04196 525 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 OMPP47874 163 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ERVK-21P61565 698 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 TMEM31Q5JXX7 168 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 MFSD12Q6NUT3 480 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 ZNF613Q6PF04 617 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 JAZF1Q86VZ6 243 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SLITRK4Q8IW52 837 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 METTL27Q8N6F8 245 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 GIMAP1Q8WWP7 306 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 CREB3L1Q96BA8 519 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 PDCD1LG2Q9BQ51 273 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 MED18Q9BUE0 208 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SLC17A9Q9BYT1 436 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
MSH6-204ENST00000445503 ASB6Q9NWX5 421 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 TAS2R10Q9NYW0 307 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 MGAT4CQ9UBM8 478 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 NDOR1Q9UHB4 597 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 POLHQ9Y253 713 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 RCE1Q9Y256 329 aa11.04□□□□□ -0.64
MSH6-204ENST00000445503 FXYD6-FXYD2A0A087WZ82 144 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ANKRD61A6NGH8 418 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 SYT5O00445 386 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 GATBO75879 557 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 ITPKBP27987 946 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ADH7P40394 386 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 TAS2R43P59537 309 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 DUSP6Q16828 381 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 TNFAIP8L1Q8WVP5 186 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ADAD1Q96M93 576 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 TEAD3Q99594 435 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 RSPH9Q9H1X1 276 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 TTYH1Q9H313 450 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 LHX9Q9NQ69 397 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 C20orf141Q9NUB4 165 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 NFKBIL1Q9UBC1 381 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 RNGTTO60942 597 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 DBIP07108 87 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 NAT1P18440 290 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ENDOUP21128 410 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 HSF2Q03933 536 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 DPTQ07507 201 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 RPE65Q16518 533 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 WDR45BQ5MNZ6 344 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 METTL17Q9H7H0 456 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 HCN3Q9P1Z3 774 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ANXA2P2A6NMY6 339 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 L7N2F9 121 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 OR6A2O95222 327 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 GNRH1P01148 92 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 ANXA2P07355 339 aaKnown RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 FGF9P31371 208 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 MTNR1BP49286 362 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 OC90Q02509 493 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 C19orf48Q6RUI8 117 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 COMMD7Q86VX2 200 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 DIO2Q92813 273 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 LINC00615Q96LM1 132 aaPredicted RBP11.03□□□□□ -0.64
MSH6-204ENST00000445503 OR2M4Q96R27 311 aa11.03□□□□□ -0.64
MSH6-204ENST00000445503 OR14A2Q96R54 314 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms