RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PAX9P55771 341 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 DSCR9P59020 149 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 YWHAGP61981 247 aaKnown RBP eCLIP4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 DPYSL3Q14195 570 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 MRPL23Q16540 153 aaKnown RBP4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 GTDC1Q4AE62 458 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 SEL1L2Q5TEA6 688 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 METTL11BQ5VVY1 283 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 MLIPQ5VWP3 458 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 HSDL2Q6YN16 418 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 CEACAM19Q7Z692 300 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 PTAR1Q7Z6K3 402 aaPredicted RBP4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 HPS6Q86YV9 775 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 STPG4Q8N801 248 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 OR4F6Q8NGB9 312 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 OR6S1Q8NH40 331 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 RHEBL1Q8TAI7 183 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 TBCKQ8TEA7 893 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 NEUROG1Q92886 237 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF479Q96JC4 524 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 PANX2Q96RD6 677 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF300Q96RE9 604 aaPredicted RBP4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 SLITRK2Q9H156 845 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 NEUROG2Q9H2A3 272 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 INPP5EQ9NRR6 644 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF446Q9NWS9 450 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 TAS2R16Q9NYV7 291 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 PTTG3PQ9NZH4 202 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 STOX2Q9P2F5 926 aaPredicted RBP4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 N6AMT1Q9Y5N5 214 aa4.4□□□□□ -1.71
TM9SF3-202ENST00000443638 IGHV4-4A0A075B6R2 117 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 A0A1B0GUH1 482 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 IQCMA0A1B0GVH7 501 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 K7ERI5 159 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CETN3O15182 167 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 EIF3HO15372 352 aaKnown RBP eCLIP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CLOCKO15516 846 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 TYROBPO43914 113 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 OR2J3O76001 311 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 AP2A1O95782 977 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 SERPINE2P07093 398 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 WNT2P09544 360 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 GCAP28676 217 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 PRDX3P30048 256 aaKnown RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 BCAP31P51572 246 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 PEX3P56589 373 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 RPS14P62263 151 aaKnown RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 ASPHQ12797 758 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 FASTKQ14296 549 aaKnown RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 NDUFA9Q16795 377 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 FAM83EQ2M2I3 478 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 DEGS2Q6QHC5 323 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 C3P1Q6ZMU1 363 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 Q6ZSR3 168 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 C9orf139Q6ZV77 190 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 SH2D5Q6ZV89 423 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CHMP1BQ7LBR1 199 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 SLC47A2Q86VL8 602 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 IFNEQ86WN2 208 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CARM1Q86X55 608 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 VRK2Q86Y07 508 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 MAIP1Q8WWC4 291 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 NR4A3Q92570 626 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CNN2Q99439 309 aaKnown RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 ADGRL4Q9HBW9 690 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 LYARQ9NX58 379 aaKnown RBP4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 STK36Q9NRP7 1315 aa4.39□□□□□ -1.71
TM9SF3-202ENST00000443638 CCDC182A6NF36 153 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 A8MXQ7 604 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 E9PQ18 207 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 H3BMQ9 156 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 WWP2O00308 870 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 POLR1CO15160 346 aaPredicted RBP4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 CHST1O43916 411 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 CLPXO76031 633 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 P04436 131 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 SERPIND1P05546 499 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 PTNP21246 168 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 HMGB2P26583 209 aaKnown RBP4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 ETV5P41161 510 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 HSPA2P54652 639 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 HMGCS2P54868 508 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 PHEXP78562 749 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 ZIC1Q15915 447 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 SLC25A25Q6KCM7 469 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 STXBP4Q6ZWJ1 553 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 NUFIP2Q7Z417 695 aaKnown RBP4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 ERI1Q8IV48 349 aaKnown RBP4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF781Q8N8C0 355 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF491Q8N8L2 437 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 TMEM178AQ8NBL3 297 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 PAQR8Q8TEZ7 354 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 CIDECQ96AQ7 238 aaPredicted RBP4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 NRBF2Q96F24 287 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 MSANTD3Q96H12 275 aa4.38□□□□□ -1.71
TM9SF3-202ENST00000443638 PLEKHA8Q96JA3 519 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms