RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 MTERF4Q7Z6M4 381 aaKnown RBP18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 SLC22A9Q8IVM8 553 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 COX18Q8N8Q8 333 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 CHODLQ9H9P2 273 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 KCNS2Q9ULS6 477 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 CARD8Q9Y2G2 431 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 ACTL7BQ9Y614 415 aa18.27■□□□□ 0.52
POLR2J3-202ENST00000443430 ZNF724A8MTY0 619 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 SMAD9O15198 467 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 RSL1D1O76021 490 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 SNRPAP09012 282 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 CSF3P09919 207 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 DHRS4L1P0CG22 281 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 CD40P25942 277 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 SLC7A1P30825 629 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 RNF144AP50876 292 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 P2RX1P51575 399 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 EFNA4P52798 201 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 CKAP4Q07065 602 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 KIAA0040Q15053 153 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 FAM166AQ6J272 317 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 ZCCHC12Q6PEW1 402 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 GPR119Q8TDV5 335 aa18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 ZNF764Q96H86 408 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 IQCGQ9H095 443 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-202ENST00000443430 NPIPB8E9PQR5 432 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 URI1O94763 535 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 LY6HO94772 140 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 HSPA4LO95757 839 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 FRKP42685 505 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 ZNF83P51522 516 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 SUMO3P55854 103 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 POU6F2P78424 691 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 SELENBP1Q13228 472 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 KLHL26Q53HC5 615 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 LRIG3Q6UXM1 1119 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 ZNF100Q8IYN0 542 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 OR52N5Q8NH56 324 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 ZFP28Q8NHY6 868 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 MRGPRX4Q96LA9 322 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 BTBD2Q9BX70 525 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 CCL27Q9Y4X3 112 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 SLC25A15Q9Y619 301 aa18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 NUP214P35658 2090 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-202ENST00000443430 NPIPA5A0A0B4J1W7 369 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 LOC100289279A0A1B0GTE1 492 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 VWC2LB2RUY7 222 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 NPIPA7E9PJI5 369 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 TBX19O60806 448 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 RAD51DO75771 328 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 NPIPA8P0DM63 369 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 NDUFAF6Q330K2 333 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 SLC25A53Q5H9E4 307 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 ZNF544Q6NX49 715 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 C8orf74Q6P047 294 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 KLHL17Q6TDP4 642 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 TIFABQ6ZNK6 161 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 ZNF572Q7Z3I7 529 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 GALNT5Q7Z7M9 940 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 JADE3Q92613 823 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 MSI2Q96DH6 328 aaKnown RBP18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 INPP5KQ9BT40 448 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 ANKZF1Q9H8Y5 726 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 GIN1Q9NXP7 522 aa18.24■□□□□ 0.51
POLR2J3-202ENST00000443430 A0A1W2PR80 420 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 WIPF1O43516 503 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 CHRNEQ04844 493 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 FBXW9Q5XUX1 488 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 LCA5Q86VQ0 697 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 CCNYL1Q8N7R7 359 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 CDS1Q92903 461 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 PPCDCQ96CD2 204 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 METTL2AQ96IZ6 378 aaKnown RBP18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 STACQ99469 402 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 PRR14Q9BWN1 585 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 REEP4Q9H6H4 257 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 DUSP22Q9NRW4 184 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 ACSS1Q9NUB1 689 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 SH3BP4Q9P0V3 963 aa18.23■□□□□ 0.51
POLR2J3-202ENST00000443430 CIB4A0PJX0 185 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 ETV2O00321 342 aaPredicted RBP18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 AKAP10O43572 662 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 SEC22BO75396 215 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 H6PDO95479 791 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 IGHV3-9P01782 118 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 PGRP06401 933 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 RUNX1T1Q06455 604 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 GGTLC2Q14390 218 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 LIPNQ5VXI9 398 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 DEPDC4Q8N2C3 294 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 FAM120BQ96EK7 910 aaKnown RBP18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 OR5B2Q96R09 309 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 HOXD1Q9GZZ0 328 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 PIGUQ9H490 435 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 EML4Q9HC35 981 aaKnown RBP18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 TNFRSF12AQ9NP84 129 aa18.22■□□□□ 0.51
POLR2J3-202ENST00000443430 H3BNH8 94 aa18.21■□□□□ 0.51
POLR2J3-202ENST00000443430 M0R1B8 84 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms