RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PRPF18Q99633 342 aaKnown RBP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 HOPXQ9BPY8 73 aaPredicted RBP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 MESP1Q9BRJ9 268 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 MEGF9Q9H1U4 602 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 SLC26A1Q9H2B4 701 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 SERHL2Q9H4I8 314 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 RPF2Q9H7B2 306 aaKnown RBP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 RMND5AQ9H871 391 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 ANKRA2Q9H9E1 313 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF160Q9HCG1 818 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF304Q9HCX3 659 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 MIEF1Q9NQG6 463 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 ACSS1Q9NUB1 689 aaPredicted RBP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 ATAD3AQ9NVI7 634 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 GID8Q9NWU2 228 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 MS4A12Q9NXJ0 267 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 CTSFQ9UBX1 484 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 SLC7A8Q9UHI5 535 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 MAPRE3Q9UPY8 281 aa4.36□□□□□ -1.71
PTPN4-206ENST00000441089 YLPM1P49750 1951 aaKnown RBP4.36□□□□□ -1.71
PTPN4-206ENST00000441089 IGLV3-12A0A075B6K2 115 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 RNF103-CHMP3A0A140T963 221 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CFAP73A6NFT4 308 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 VSTM2BA6NLU5 285 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FAM47E-STBD1D6RA91 191 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 UPK1AO00322 258 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ACOT8O14734 319 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CTNSO60931 367 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 GPR75O95800 540 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NPPAP01160 153 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CLPSP04118 112 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FHP07954 510 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ICAM2P13598 275 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CPMP14384 443 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FAHP16930 419 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 GPX2P18283 190 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CSNK2A2P19784 350 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FBLP22087 321 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 UQCRC2P22695 453 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NTSP30990 170 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 SOAT1P35610 550 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 GSK3BP49841 420 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 RASSF2P50749 326 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 XKP51811 444 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 MANFP55145 182 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR4D2P58180 307 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 MRPS35P82673 323 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 MS4A2Q01362 244 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 LIPEQ05469 1076 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PMPCAQ10713 525 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 MLC1Q15049 377 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ADRM1Q16186 407 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TRMT12Q53H54 448 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF628Q5EBL2 1059 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 SAXO2Q658L1 398 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NIPAL1Q6NVV3 410 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PRMT9Q6P2P2 845 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM107Q6UX40 140 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 SHISA6Q6ZSJ9 500 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF621Q6ZSS3 439 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NDUFAF7Q7L592 441 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF575Q86XF7 245 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PTOV1Q86YD1 416 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF595Q8IYB9 648 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PRSS58Q8IYP2 241 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 LRRC25Q8N386 305 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FBXW8Q8N3Y1 598 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NATD1Q8N6N6 113 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 HORMAD2Q8N7B1 307 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR7G2Q8NG99 324 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR8J3Q8NGG0 315 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR10Q1Q8NGQ4 319 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR10A6Q8NH74 314 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PNPT1Q8TCS8 783 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 KAT2AQ92830 837 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TANKQ92844 425 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PPWD1Q96BP3 646 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CTHRC1Q96CG8 243 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ELP4Q96EB1 424 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 FAM120BQ96EK7 910 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZBED6CLQ96FA7 236 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF583Q96ND8 569 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 OR1F2PQ96R84 312 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 BBS4Q96RK4 519 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 SLC35A5Q9BS91 424 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 VN1R1Q9GZP7 353 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PCDHAC1Q9H158 963 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 KAT8Q9H7Z6 458 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TPT1P8Q9HAU6 139 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 CLK4Q9HAZ1 481 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 SPAG4Q9NPE6 437 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PRTFDC1Q9NRG1 225 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NDE1Q9NXR1 346 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TAS2R9Q9NYW1 312 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ADA2Q9NZK5 511 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 MAT2BQ9NZL9 334 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TRPC4Q9UBN4 977 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms