RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 EIF2B5Q13144 721 aaKnown RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 SNTB2Q13425 540 aaKnown RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 ZNF234Q14588 700 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SLC25A35Q3KQZ1 300 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 CLVS2Q5SYC1 327 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SLC30A6Q6NXT4 461 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 Q6ZTK2 550 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SLITRK4Q8IW52 837 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 ZNF480Q8WV37 535 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SMPDL3AQ92484 453 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SCAMP4Q969E2 229 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 WDR34Q96EX3 536 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 ELMOD3Q96FG2 381 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 FAIM2Q9BWQ8 316 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 C20orf85Q9H1P6 137 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SUV39H2Q9H5I1 410 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 TRABD2BA6NFA1 517 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 C10orf142B7Z368 130 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 L7N2F9 121 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 TSPAN6O43657 245 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 UBL3O95164 117 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 EPPINO95925 133 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 LPLP06858 475 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 NR2F1P10589 423 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 F8A1P23610 371 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 IFNGR2P38484 337 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 PITPNAQ00169 270 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 DHODHQ02127 395 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SLC22A10Q63ZE4 541 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 CDC73Q6P1J9 531 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 FAM83HQ6ZRV2 1179 aaPredicted RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 ASPGQ86U10 573 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 STPG2Q8N412 459 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SIRT6Q8N6T7 355 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 OR51Q1Q8NH59 317 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 COQ8AQ8NI60 647 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 XAGE5Q8WWM1 108 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 FAM46AQ96IP4 442 aaKnown RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 ABCG4Q9H172 646 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 OR51I1Q9H343 314 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SIRT3Q9NTG7 399 aaPredicted RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 BABAM2Q9NXR7 383 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 P2RX2Q9UBL9 471 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 B4GALT6Q9UBX8 382 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 ING1Q9UK53 422 aaPredicted RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 PPIL1Q9Y3C6 166 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 CHST2Q9Y4C5 530 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 PLSCR5A0PG75 271 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 LRRN3E7EW58 273 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SOCS6O14544 535 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 KLF9Q13886 244 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 RRM2BQ7LG56 351 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 TPRA1Q86W33 373 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 LILRB1Q8NHL6 650 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 PCDH15Q96QU1 1955 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 PELOQ9BRX2 385 aaKnown RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 ZNF416Q9BWM5 594 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 JAM3Q9BX67 310 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 LRRN3Q9H3W5 708 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 NEUROD4Q9HD90 331 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ZNF275Q9NSD4 429 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 H2AFY2Q9P0M6 372 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 FLVCR2Q9UPI3 526 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 TBC1D3BA6NDS4 549 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 POM121CA8CG34 1229 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 H0YC42 278 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 BUD31P41223 144 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 KIAA1024LP59773 190 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ARL9Q6T311 187 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ANKRD53Q8N9V6 530 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ZNF740Q8NDX6 193 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 OR51G2Q8NGK0 314 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 FOPNLQ96NB1 174 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SMAD5Q99717 465 aaKnown RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 SPATA5L1Q9BVQ7 753 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SLC6A15Q9H2J7 730 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 PCDHB16Q9NRJ7 776 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 C5AR2Q9P296 337 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ATPIF1Q9UII2 106 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ZNF175Q9Y473 711 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 CACNA1HO95180 2353 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 NUMA1Q14980 2115 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SLC2A10O95528 541 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 NTN1O95631 604 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 TGM6O95932 706 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 PDHA2P29803 388 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 VASPP50552 380 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 RPS7P62081 194 aaKnown RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 NHLH1Q02575 133 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 GPR68Q15743 365 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SFRP4Q6FHJ7 346 aaPredicted RBP7.95□□□□□ -1.14
HPS4-206ENST00000439453 MTFR2Q6P444 385 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 CEACAM19Q7Z692 300 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SLC9B2Q86UD5 537 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 HAVCR2Q8TDQ0 301 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 THAP4Q8WY91 577 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ALG8Q9BVK2 526 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms