RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 C8orf4Q9NR00 106 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 RPS6KB2Q9UBS0 482 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 APC2O95996 2303 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 A0A0B4J2E0 115 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 A0A1B0GX12 115 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 PDLIM1O00151 329 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 CEACAM4O75871 244 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 SNX4O95219 450 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 THY1P04216 161 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 DCST1Q5T197 706 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 WBP2NLQ6ICG8 309 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 LRRC69Q6ZNQ3 347 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 STK32CQ86UX6 486 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 CADM2Q8N3J6 435 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 TMCC3Q9ULS5 477 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 SLC7A7Q9UM01 511 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 A0A1B0GWA3 101 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 ANKUB1A6NFN9 424 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 NEURL1O76050 574 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 F10P00742 488 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 IDH2P48735 452 aaKnown RBP20.97■□□□□ 0.95
CPSF4-204ENST00000436336 TLE3Q04726 772 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 MICAQ29983 383 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 OR5M10Q6IEU7 315 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 PPP4R4Q6NUP7 873 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 ULK3Q6PHR2 472 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 HS3ST5Q8IZT8 346 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 CBR4Q8N4T8 237 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 ZNF563Q8TA94 476 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 SLC7A13Q8TCU3 470 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 FUZQ9BT04 418 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 GABARAPL1Q9H0R8 117 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 PDP1Q9P0J1 537 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-204ENST00000436336 MAGED1Q9Y5V3 778 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-204ENST00000436336 ACACAQ13085 2346 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 ZFHX4Q86UP3 3567 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 CELSR3Q9NYQ7 3312 aa20.97■□□□□ 0.95
CPSF4-204ENST00000436336 TRBV4-1A0A0J9YWV2 114 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 OR5H15A6NDH6 313 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SOCS2O14508 198 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 CHP2O43745 196 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 RASAL1O95294 804 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 NUDT14O95848 222 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 OR1C1Q15619 314 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 OTUD3Q5T2D3 398 aaPredicted RBP20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SWT1Q5T5J6 900 aaKnown RBP20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SPINK14Q6IE38 97 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 TBPL2Q6SJ96 375 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 PACS2Q86VP3 889 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 PACRGLQ8N7B6 248 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 GPR119Q8TDV5 335 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 GIPC3Q8TF64 312 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 DNAJA4Q8WW22 397 aaPredicted RBP20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SLC38A4Q969I6 547 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 TMEM41AQ96HV5 264 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SIGLEC12Q96PQ1 595 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 BARD1Q99728 777 aaKnown RBP20.96■□□□□ 0.95
CPSF4-204ENST00000436336 SLC29A1Q99808 456 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 OSBPL10Q9BXB5 764 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 VCXQ9H320 206 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 PLA2G3Q9NZ20 509 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 MED11Q9P086 117 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 CEP295Q9C0D2 2601 aa20.96■□□□□ 0.95
CPSF4-204ENST00000436336 GMFGO60234 142 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 CCNB2O95067 398 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 LYPD3O95274 346 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF26P17031 533 aaPredicted RBP20.95■□□□□ 0.94
CPSF4-204ENST00000436336 FOXD4Q12950 439 aaPredicted RBP20.95■□□□□ 0.94
CPSF4-204ENST00000436336 LAPTM4AQ15012 233 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 ALG10BQ5I7T1 473 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 WDSUB1Q8N9V3 476 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 HAS2Q92819 552 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 KLHDC3Q9BQ90 382 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 PRSS27Q9BQR3 290 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 SELENONQ9NZV5 590 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 B4DXG7 233 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 K7ENP7 123 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 EI24O14681 340 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 SNPHO15079 494 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 SLC1A3P43003 542 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 PODNL1Q6PEZ8 512 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 INO80CQ6PI98 192 aaPredicted RBP20.95■□□□□ 0.94
CPSF4-204ENST00000436336 IGFL2Q6UWQ7 119 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 PLCZ1Q86YW0 608 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 NKAIN4Q8IVV8 208 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 LINC00471Q8N535 108 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 FADS6Q8N9I5 356 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 OR2M3Q8NG83 312 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 OR10G2Q8NGC3 310 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 MPP4Q96JB8 637 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 PSD2Q9BQI7 771 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 DSN1Q9H410 356 aa20.95■□□□□ 0.94
CPSF4-204ENST00000436336 URB1O60287 2271 aaKnown RBP20.94■□□□□ 0.94
CPSF4-204ENST00000436336 SH3PXD2BA1X283 911 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 ARRDC5A6NEK1 342 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 SLC25A12O75746 678 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 CNR1P21554 472 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 PRKACGP22612 351 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 MASP1P48740 699 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 UCNP55089 124 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms