RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 GPR171O14626 319 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 FLRT2O43155 660 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SPINT1O43278 529 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SSNA1O43805 119 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 PEX14O75381 377 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ADH1CP00326 375 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 AK1P00568 194 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ASGR2P07307 311 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 RRASP10301 218 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ZNF3P17036 446 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ATP5A1P25705 553 aaKnown RBP13.71□□□□□ -0.21
DDX56-205ENST00000433257 SHC1P29353 583 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 GPR4P46093 362 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 DHODHQ02127 395 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ILF3Q12906 894 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX56-205ENST00000433257 SNTB2Q13425 540 aaKnown RBP13.71□□□□□ -0.21
DDX56-205ENST00000433257 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 UBE2NLQ5JXB2 153 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 PLBD1Q6P4A8 553 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ARL9Q6T311 187 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 COMMD7Q86VX2 200 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 VRK2Q86Y07 508 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 OR6V1Q8N148 313 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SYS1Q8N2H4 156 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 TP53I13Q8NBR0 393 aaPredicted RBP13.71□□□□□ -0.21
DDX56-205ENST00000433257 HAVCR2Q8TDQ0 301 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SMIM4Q8WVI0 70 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 MS4A6EQ96DS6 147 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 LCORQ96JN0 433 aaPredicted RBP13.71□□□□□ -0.21
DDX56-205ENST00000433257 ASB16Q96NS5 453 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 CTPS2Q9NRF8 586 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SLCO1C1Q9NYB5 712 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 CES1P1Q9UKY3 287 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 CSNK1G3Q9Y6M4 447 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 NOTCH4Q99466 2003 aa13.71□□□□□ -0.22
DDX56-205ENST00000433257 VCANP13611 3396 aa13.71□□□□□ -0.22
DDX56-205ENST00000433257 CKAP5Q14008 2032 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 TRAV6A0A075B6T7 132 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 TBC1D3EA0A087X179 549 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 A0A0G2JK05 382 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 ZNF879B4DU55 563 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 BHLHE40O14503 412 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 NRG2O14511 850 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 SOCS6O14544 535 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 KHNYNO15037 678 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 ERI3O43414 337 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 DBIP07108 87 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 CISD3P0C7P0 127 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 IFI30P13284 250 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 WEE1P30291 646 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 GBX2P52951 348 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 RPL6Q02878 288 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 FZD5Q13467 585 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 KRT33BQ14525 404 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 HNRNPA1L2Q32P51 320 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 DMKNQ6E0U4 476 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 PARM1Q6UWI2 310 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 TMPRSS11FQ6ZWK6 438 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 NKAIN4Q8IVV8 208 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 CCDC116Q8IYX3 515 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 SPICQ8N5J4 248 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 OR10H4Q8NGA5 316 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 ASB13Q8WXK3 278 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 SORCS1Q8WY21 1168 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 ARRDC3Q96B67 414 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 CNRIP1Q96F85 164 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 HDAC8Q9BY41 377 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 ZNF436Q9C0F3 470 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 PPA2Q9H2U2 334 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 GPN1Q9HCN4 374 aaPredicted RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 SIDT1Q9NXL6 827 aaKnown RBP13.7□□□□□ -0.22
DDX56-205ENST00000433257 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
DDX56-205ENST00000433257 A0A1B0GUH1 482 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 M0R233 179 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 GPRIN2O60269 458 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 AIFM1O95831 613 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 PRG2P13727 222 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 CPN1P15169 458 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 GIFP27352 417 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TRHRP34981 398 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF81P51508 661 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 FOXK2Q01167 660 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 MADCAM1Q13477 382 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 EXOSC2Q13868 293 aaKnown RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 AANATQ16613 207 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ACSM3Q53FZ2 586 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 C6orf132Q5T0Z8 1188 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 GARNL3Q5VVW2 1013 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ARHGAP11AQ6P4F7 1023 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF793Q6ZN11 406 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms