RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ATP6V1C2Q8NEY4 427 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 GPR119Q8TDV5 335 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 RADILQ96JH8 1075 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 ACTRT3Q9BYD9 372 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 CXorf36Q9H7Y0 433 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 ATP6V1HQ9UI12 483 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
PRKDC-203ENST00000432581 FAF1Q9UNN5 650 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-203ENST00000432581 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 A8MV72 311 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TMEM114B3SHH9 223 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 SCAMP2O15127 329 aaKnown RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 OIP5O43482 229 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 EIF4E2O60573 245 aaKnown RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 LYZL6O75951 148 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 CD8AP01732 235 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 BCKDHAP12694 445 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 EFNA1P20827 205 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 MAPK1P28482 360 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 ATP12AP54707 1039 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 CDH11P55287 796 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 RASGEF1BQ0VAM2 473 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TOMM34Q15785 309 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 AGAP6Q5VW22 663 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 NATD1Q8N6N6 113 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 OR5P2Q8WZ92 322 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 RHNO1Q9BSD3 238 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 TUBB1Q9H4B7 451 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 ING1Q9UK53 422 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-203ENST00000432581 FIS1Q9Y3D6 152 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 DTNAQ9Y4J8 743 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 DNAJC15Q9Y5T4 150 aa13.18□□□□□ -0.3
PRKDC-203ENST00000432581 NPIPA5A0A0B4J1W7 369 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 SHISA9B4DS77 424 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 NPIPA7E9PJI5 369 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ETV2O00321 342 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 COPEO14579 308 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 CYTIPO60759 359 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 RAMP1O60894 148 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 NDUFS7O75251 213 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 NPIPA8P0DM63 369 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 GGT1P19440 569 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 CCT3P49368 545 aaKnown RBP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 CBFBQ13951 182 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 SPDYE7PQ495Y7 208 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ARL13AQ5H913 290 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 C3orf33Q6P1S2 294 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 DDIASQ8IXT1 998 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ADAD1Q96M93 576 aaKnown RBP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 ATAD3AQ9NVI7 634 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 PRSS50Q9UI38 385 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-203ENST00000432581 CADP27708 2225 aa13.17□□□□□ -0.3
PRKDC-203ENST00000432581 GOLGA8QA0A0J9YX86 632 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 A0A1W2PNR3 127 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 GOLGA8OA6NCC3 632 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 NPIPB9F8W1W9 429 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 GOLGA8NF8WBI6 632 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 ABCD4O14678 606 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
PRKDC-203ENST00000432581 ZNF264O43296 627 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 PGM3O95394 542 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 LAMP1P11279 417 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 UBL4AP11441 157 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 COX5AP20674 150 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 RNF144AP50876 292 aaPredicted RBP13.16□□□□□ -0.3
PRKDC-203ENST00000432581 NUDT6P53370 316 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 C21orf58P58505 322 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 DSCR9P59020 149 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 TP53BP2Q13625 1128 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 QPRTQ15274 297 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 LSM12Q3MHD2 195 aaKnown RBP13.16□□□□□ -0.3
PRKDC-203ENST00000432581 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 GALNT5Q7Z7M9 940 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 OR7A2PQ8NGA2 310 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
PRKDC-203ENST00000432581 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms