RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 AK9Q5TCS8 1911 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 A0A075B6Q4 140 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 TRBV2A0A0J9YWF9 115 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 A0A0U1RQV5 110 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 A0A0U1RRA0 63 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ERICH2A1L162 156 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 YJEFN3A6XGL0 299 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 WRBO00258 174 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 NDUFAB1O14561 156 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ECI2O75521 394 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ECDO95905 644 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 LGI1O95970 557 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ACTL6AO96019 429 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 CHRNGP07510 517 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 PRPS2P11908 318 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 CALB2P22676 271 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SLC26A2P50443 739 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 CNN1P51911 297 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 HNRNPFP52597 415 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 AIF1P55008 147 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 PRMT2P55345 433 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SSTP61278 116 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 UBE2IP63279 158 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 TGM3Q08188 693 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 PDZK1IP1Q13113 114 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ITGB3BPQ13352 177 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 MSLNQ13421 630 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 CHRNA6Q15825 494 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 HAGHQ16775 308 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SEL1L2Q5TEA6 688 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SASS6Q6UVJ0 657 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 STOX1Q6ZVD7 989 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ERASQ7Z444 233 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 NANOGNBQ7Z5D8 188 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 BPIFCQ8NFQ6 507 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 OR56B1Q8NGI3 324 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 OR13F1Q8NGS4 319 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 OR4L1Q8NH43 312 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 PHOSPHO2Q8TCD6 241 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SETD7Q8WTS6 366 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 CCDC12Q8WUD4 166 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 PDCD6IPQ8WUM4 868 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 FRAT1Q92837 279 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 C14orf79Q96F83 325 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ZNF799Q96GE5 643 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 C9orf85Q96MD7 179 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 KIR2DL4Q99706 377 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 TSG101Q99816 390 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SH3GL3Q99963 347 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 FAM173AQ9BQD7 235 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 MTG1Q9BT17 334 aaPredicted RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 RAB17Q9H0T7 212 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 EXO5Q9H790 373 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 PIGVQ9NUD9 493 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.27□□□□□ -2.055e-6■□□□□ 10.5
CLK1-204ENST00000432425 HYPKQ9NX55 129 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 CNOT2Q9NZN8 540 aaKnown RBP2.27□□□□□ -2.05
CLK1-204ENST00000432425 DPM3Q9P2X0 92 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 RPS6KB2Q9UBS0 482 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 KCNN3Q9UGI6 736 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 IL20RAQ9UHF4 553 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 ENTPD4Q9Y227 616 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 SLC22A14Q9Y267 594 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 RNF115Q9Y4L5 304 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 CARMIL1Q5VZK9 1371 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 GTF3C1Q12789 2109 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 FAM230AA0A1W2PPH8 454 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 MACROD2A1Z1Q3 448 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 OR2AG2A6NM03 316 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 IQCF5A8MTL0 148 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 SPECC1L-ADORA2AF8WAN1 911 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 H0Y8G0 127 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 LGALS8O00214 317 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 PRRG1O14668 218 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 LSM1O15116 133 aaKnown RBP2.26□□□□□ -2.05
CLK1-204ENST00000432425 B4GALT2O60909 372 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 ATP5HO75947 161 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 TXNDC12O95881 172 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 PGK2P07205 417 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 CRYGCP07315 174 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 SERPINF2P08697 491 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 CLTAP09496 248 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 OR8G3PP0DMU2 310 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 B4GALT1P15291 398 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 CYP2B6P20813 491 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 ATP5C1P36542 298 aaKnown RBP2.26□□□□□ -2.05
CLK1-204ENST00000432425 XCR1P46094 333 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 ZNF133P52736 654 aaPredicted RBP2.26□□□□□ -2.05
CLK1-204ENST00000432425 CRYBB1P53674 252 aaPredicted RBP2.26□□□□□ -2.05
CLK1-204ENST00000432425 GEMP55040 296 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 MTTPP55157 894 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 GALK2Q01415 458 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 SERTAD2Q14140 314 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 PON2Q15165 354 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 SNCBQ16143 134 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 STX1AQ16623 288 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 CCDC14Q49A88 953 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 HIKESHIQ53FT3 197 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 PIP5KL1Q5T9C9 394 aa2.26□□□□□ -2.05
CLK1-204ENST00000432425 KHDRBS2Q5VWX1 349 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms