RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KLHL26Q53HC5 615 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ABHD17CQ6PCB6 329 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 KLHL24Q6TFL4 600 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 MRPL43Q8N983 215 aaKnown RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 LSM14AQ8ND56 463 aaKnown RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 CASTOR1Q8WTX7 329 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 GAL3ST3Q96A11 431 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 OR2M2Q96R28 347 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 SLC38A3Q99624 504 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 PITHD1Q9GZP4 211 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ARRDC5A6NEK1 342 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 H3BQ06 376 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 HRO43593 1189 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 GIMD1P0DJR0 217 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 PRKACBP22694 351 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 RBMS1P29558 406 aaKnown RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 PTH2RP49190 550 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 MTNR1BP49286 362 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 EIF2B5Q13144 721 aaKnown RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 RUNX3Q13761 415 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 INSL4Q14641 139 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 DECR1Q16698 335 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 FAM180AQ6UWF9 173 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 SYT9Q86SS6 491 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 TMEM99Q8N816 258 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF527Q8NB42 609 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 OR52N1Q8NH53 320 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ZFAND1Q8TCF1 268 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 SMAP2Q8WU79 429 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 TMEM43Q9BTV4 400 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 IL21RQ9HBE5 538 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 STARD5Q9NSY2 213 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 MED17Q9NVC6 651 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ASB6Q9NWX5 421 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 PLEKHM1Q9Y4G2 1056 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 MN1Q10571 1320 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 FUT1P19526 365 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 GPR143P51810 404 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ERVK-25P63136 954 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ZCCHC12Q6PEW1 402 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ZNF471Q9BX82 626 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-201ENST00000429747 ATG5Q9H1Y0 275 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 C11orf49Q9H6J7 331 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 KCMF1Q9P0J7 381 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 TRAPPC4Q9Y296 219 aa11.78□□□□□ -0.52
CPNE4-201ENST00000429747 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 SPARCP09486 303 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 HLA-DMAP28067 261 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 BMPR1AP36894 532 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 HMGA2P52926 109 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 OC90Q02509 493 aaPredicted RBP11.77□□□□□ -0.52
CPNE4-201ENST00000429747 KIAA1211LQ6NV74 962 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 FAM198BQ6UWH4 519 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 CREB3L2Q70SY1 520 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 FCRLAQ7L513 359 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 PRSS45Q7RTY3 260 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 ANKRD53Q8N9V6 530 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.52
CPNE4-201ENST00000429747 WDR92Q96MX6 357 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 SLC6A15Q9H2J7 730 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 A4GNTQ9UNA3 340 aa11.77□□□□□ -0.52
CPNE4-201ENST00000429747 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 TMEM150CB9EJG8 249 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 EIF1AYO14602 144 aaKnown RBP11.77□□□□□ -0.53
CPNE4-201ENST00000429747 PPM1BO75688 479 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 PRKCAP17252 672 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 EIF1AXP47813 144 aaKnown RBP11.77□□□□□ -0.53
CPNE4-201ENST00000429747 CTXN1P60606 82 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 C12orf73Q69YU5 71 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 SLC48A1Q6P1K1 146 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 CHST2Q9Y4C5 530 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 AK1P00568 194 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 C5AR1P21730 350 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 GDNFP39905 211 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 E2F1Q01094 437 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 FOXK2Q01167 660 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 TPRA1Q86W33 373 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 OR2L3Q8NG85 312 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 OR5M3Q8NGP4 307 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 MMABQ96EY8 250 aaPredicted RBP11.77□□□□□ -0.53
CPNE4-201ENST00000429747 PEX11GQ96HA9 241 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 NRTNQ99748 197 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 VN1R3Q9BXE9 311 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 ZBP1Q9H171 429 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 PRTFDC1Q9NRG1 225 aa11.77□□□□□ -0.53
CPNE4-201ENST00000429747 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
CPNE4-201ENST00000429747 TVP23AA6NH52 213 aa11.76□□□□□ -0.53
CPNE4-201ENST00000429747 C2orf74A8MZ97 194 aa11.76□□□□□ -0.53
CPNE4-201ENST00000429747 PCGF3Q3KNV8 242 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms