RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ZNF621Q6ZSS3 439 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 EIF3MQ7L2H7 374 aaKnown RBP16.5■□□□□ 0.23
GPC1-205ENST00000427506 OR6K3Q8NGY3 331 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ROBO4Q8WZ75 1007 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ROPN1LQ96C74 230 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 MARK4Q96L34 752 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 MRGPRX4Q96LA9 322 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 WFIKKN1Q96NZ8 548 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 MED18Q9BUE0 208 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 KLHL4Q9C0H6 718 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 POLE3Q9NRF9 147 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 GLRX2Q9NS18 164 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 KLHL28Q9NXS3 571 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ZNF226Q9NYT6 803 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 KCNE5Q9UJ90 142 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 TESMINQ9Y4I5 508 aa16.5■□□□□ 0.23
GPC1-205ENST00000427506 ANKHD1Q8IWZ3 2542 aaKnown RBP16.5■□□□□ 0.23
GPC1-205ENST00000427506 NUP214P35658 2090 aaPredicted RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 CENPVL1A0A0U1RR11 272 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 C16orf97H3BN30 126 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 EFNA2O43921 213 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 HRGP04196 525 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 IDO1P14902 403 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 SLC7A1P30825 629 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 UGT2B10P36537 528 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 PCYT1AP49585 367 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 ANXA11P50995 505 aaKnown RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 SELENBP1Q13228 472 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 SLC9B1Q4ZJI4 515 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 TYW3Q6IPR3 259 aaKnown RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 RNF130Q86XS8 419 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 GLB1L3Q8NCI6 653 aaPredicted RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 PIWIL2Q8TC59 973 aaKnown RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 ZNF75CPQ92670 426 aaPredicted RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 CPNE4Q96A23 557 aaPredicted RBP16.49■□□□□ 0.23
GPC1-205ENST00000427506 INPP5KQ9BT40 448 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 PLSCR4Q9NRQ2 329 aa16.49■□□□□ 0.23
GPC1-205ENST00000427506 KIAA0513O60268 411 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 SLC22A3O75751 556 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 GSNP06396 782 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 PGCP20142 388 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 SKP2Q13309 424 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 MAPK14Q16539 360 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 ZNF239Q16600 458 aaKnown RBP16.48■□□□□ 0.23
GPC1-205ENST00000427506 PDCD4Q53EL6 469 aaKnown RBP16.48■□□□□ 0.23
GPC1-205ENST00000427506 STK32CQ86UX6 486 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 ZNF619Q8N2I2 560 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 ZFP90Q8TF47 636 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 TMEM234Q8WY98 164 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 ZC3HAV1LQ96H79 300 aaKnown RBP16.48■□□□□ 0.23
GPC1-205ENST00000427506 FANCFQ9NPI8 374 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 SLC35A3Q9Y2D2 325 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 CCDC168Q8NDH2 2452 aa16.48■□□□□ 0.23
GPC1-205ENST00000427506 HMGN4O00479 90 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 RFXANKO14593 260 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 KLF11O14901 512 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 DIAPH2O60879 1101 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 C1QCP02747 245 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 RAF1P04049 648 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 IL6P05231 212 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 GUSBP08236 651 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 CDKN2CP42773 168 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 FUT5Q11128 374 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 KEAP1Q14145 624 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 GSTA3Q16772 222 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 TIGD2Q4W5G0 525 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 SLC25A53Q5H9E4 307 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 TMEM201Q5SNT2 666 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ANKRD34AQ69YU3 496 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 PAMR1Q6UXH9 720 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 FRRS1Q6ZNA5 592 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ZNF550Q7Z398 422 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 HMGN2P46Q86SG4 172 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ZNF563Q8TA94 476 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 PNPT1Q8TCS8 783 aaKnown RBP16.47■□□□□ 0.23
GPC1-205ENST00000427506 OIT3Q8WWZ8 545 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ST8SIA1Q92185 356 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ZNF524Q96C55 264 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 MAELQ96JY0 434 aaKnown RBP16.47■□□□□ 0.23
GPC1-205ENST00000427506 FOXC2Q99958 501 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 SRXN1Q9BYN0 137 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 SAP130Q9H0E3 1048 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 QRSL1Q9H0R6 528 aaKnown RBP16.47■□□□□ 0.23
GPC1-205ENST00000427506 C12orf49Q9H741 205 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 SERINC1Q9NRX5 453 aa16.47■□□□□ 0.23
GPC1-205ENST00000427506 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.47■□□□□ 0.23
GPC1-205ENST00000427506 C6orf203Q9P0P8 240 aaPredicted RBP16.47■□□□□ 0.23
GPC1-205ENST00000427506 A0A1W2PNR3 127 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 UBDO15205 165 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 H6PDO95479 791 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 ANP32DO95626 131 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 NTN1O95631 604 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 KRT75O95678 551 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 CCKARP32238 428 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 SESN3P58005 492 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms