RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 FBXO8Q9NRD0 319 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CES1P1Q9UKY3 287 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 PLCL2Q9UPR0 1127 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ERVK-11Q9UQG0 969 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ASB4Q9Y574 426 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 GMEB1Q9Y692 573 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SDK2Q58EX2 2172 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 FER1L5A0AVI2 2057 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 A0A0J9YVX5 310 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GOLGA8QA0A0J9YX86 632 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GOLGA8OA6NCC3 632 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 ASPDHA6ND91 283 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A9PA6NNJ1 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GOLGA8NF8WBI6 632 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TXNDC9O14530 226 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 NDUFAB1O14561 156 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 UBDO15205 165 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 NDUFS4O43181 175 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GALR3O60755 368 aaPredicted RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 DIAPH2O60879 1101 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 DNAJB6O75190 326 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 PEX11AO75192 247 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CSO75390 466 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 DDAH2O95865 285 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 G6PDP11413 515 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 IDO1P14902 403 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 ALOX12P18054 663 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 HIST1H1TP22492 207 aaPredicted RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 IL12AP29459 219 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TIA1P31483 386 aaKnown RBP eCLIP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 RORAP35398 523 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FRKP42685 505 aaPredicted RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 HNRNPFP52597 415 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CLDN8P56748 225 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 HILS1P60008 231 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TRA2BP62995 288 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 RCAN2Q14206 197 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 IL11RAQ14626 422 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 KRT72Q14CN4 511 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 HERC3Q15034 1050 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 RBBP5Q15291 538 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GSTA3Q16772 222 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 BTBD16Q32M84 506 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 ATP6AP1LQ52LC2 224 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TCTE1Q5JU00 501 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FHL5Q5TD97 284 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 IL23RQ5VWK5 629 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 OR4C11Q6IEV9 310 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FAM71E1Q6IPT2 247 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 RHBDD2Q6NTF9 364 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 NOXRED1Q6NXP6 359 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CYP20A1Q6UW02 462 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 C1orf52Q8N6N3 182 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CSNK1A1LQ8N752 337 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 ACOT4Q8N9L9 421 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 SLC38A9Q8NBW4 561 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CAMKVQ8NCB2 501 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CCDC197Q8NCU1 140 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 CCT6BQ92526 530 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TESCQ96BS2 214 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TM4SF18Q96CE8 201 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TUBGCP3Q96CW5 907 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 THOC1Q96FV9 657 aaKnown RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 EGLN2Q96KS0 407 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 LRFN5Q96NI6 719 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 GBP5Q96PP8 586 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 HDHD5Q9BXW7 423 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 PDE7BQ9NP56 450 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 MYNNQ9NPC7 610 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 SLC22A11Q9NSA0 550 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 FGF21Q9NSA1 209 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 ATP6V1HQ9UI12 483 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 SATB2Q9UPW6 733 aa5.02□□□□□ -1.61
C9orf3-205ENST00000427193 TMEM184BQ9Y519 407 aaPredicted RBP5.02□□□□□ -1.61
C9orf3-205ENST00000427193 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 ANKDD1BA6NHY2 528 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 E9PBE3 544 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 H0YIG0 161 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 RTCAO00442 366 aaKnown RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 HSPB6O14558 160 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 ZNF749O43361 778 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 KLHL41O60662 606 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 CCDC22O60826 627 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 SEC22BO75396 215 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 NSA2O95478 260 aaKnown RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 UMODP07911 640 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 SLC35G6P0C7Q6 338 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 PRPS2P11908 318 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 CCL4P13236 92 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 TCEA1P23193 301 aaKnown RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 EFNA3P52797 238 aa5.01□□□□□ -1.61
C9orf3-205ENST00000427193 HNRNPH2P55795 449 aaKnown RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 VSX2P58304 361 aaPredicted RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 STXBP1P61764 594 aaKnown RBP5.01□□□□□ -1.61
C9orf3-205ENST00000427193 IGLV3-21P80748 117 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms